Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA4P43681 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRNA4P43681 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA4P43681 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.73■□□□□ 0.27
CHRNA4P43681 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA4P43681 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CHRNA4P43681 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.73■□□□□ 0.27
CHRNA4P43681 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA4P43681 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.73■□□□□ 0.27
CHRNA4P43681 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA4P43681 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA4P43681 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA4P43681 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CHRNA4P43681 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CHRNA4P43681 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA4P43681 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA4P43681 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.73■□□□□ 0.27
CHRNA4P43681 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA4P43681 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CHRNA4P43681 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.73■□□□□ 0.27
CHRNA4P43681 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.73■□□□□ 0.27
CHRNA4P43681 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA4P43681 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA4P43681 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA4P43681 PDPK2P-202ENST00000562415 1191 ntBASIC16.73■□□□□ 0.27
CHRNA4P43681 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CHRNA4P43681 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.73■□□□□ 0.27
CHRNA4P43681 AL009183.1-201ENST00000603760 355 ntBASIC16.73■□□□□ 0.27
CHRNA4P43681 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA4P43681 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA4P43681 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA4P43681 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.73■□□□□ 0.27
CHRNA4P43681 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA4P43681 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA4P43681 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA4P43681 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA4P43681 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.73■□□□□ 0.27
CHRNA4P43681 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CHRNA4P43681 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.73■□□□□ 0.27
CHRNA4P43681 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA4P43681 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA4P43681 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA4P43681 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.72■□□□□ 0.27
CHRNA4P43681 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.72■□□□□ 0.27
CHRNA4P43681 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
CHRNA4P43681 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA4P43681 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.72■□□□□ 0.27
CHRNA4P43681 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA4P43681 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA4P43681 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA4P43681 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.72■□□□□ 0.27
CHRNA4P43681 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA4P43681 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CHRNA4P43681 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CHRNA4P43681 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.72■□□□□ 0.27
CHRNA4P43681 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.72■□□□□ 0.27
CHRNA4P43681 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA4P43681 AC140658.5-201ENST00000438532 169 ntBASIC16.72■□□□□ 0.27
CHRNA4P43681 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.72■□□□□ 0.27
CHRNA4P43681 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.72■□□□□ 0.27
CHRNA4P43681 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.72■□□□□ 0.27
CHRNA4P43681 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.72■□□□□ 0.27
CHRNA4P43681 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.72■□□□□ 0.27
CHRNA4P43681 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.72■□□□□ 0.27
CHRNA4P43681 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.72■□□□□ 0.27
CHRNA4P43681 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.72■□□□□ 0.27
CHRNA4P43681 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CHRNA4P43681 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
CHRNA4P43681 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.72■□□□□ 0.27
CHRNA4P43681 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.72■□□□□ 0.27
CHRNA4P43681 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.72■□□□□ 0.27
CHRNA4P43681 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.72■□□□□ 0.27
CHRNA4P43681 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.72■□□□□ 0.27
CHRNA4P43681 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.72■□□□□ 0.27
CHRNA4P43681 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA4P43681 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.72■□□□□ 0.27
CHRNA4P43681 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA4P43681 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CHRNA4P43681 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
CHRNA4P43681 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA4P43681 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA4P43681 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA4P43681 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA4P43681 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRNA4P43681 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
CHRNA4P43681 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CHRNA4P43681 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CHRNA4P43681 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.72■□□□□ 0.27
CHRNA4P43681 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CHRNA4P43681 LINC02199-201ENST00000506655 2702 ntBASIC16.71■□□□□ 0.27
CHRNA4P43681 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHRNA4P43681 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHRNA4P43681 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHRNA4P43681 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CHRNA4P43681 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.71■□□□□ 0.27
CHRNA4P43681 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.71■□□□□ 0.27
CHRNA4P43681 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CHRNA4P43681 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CHRNA4P43681 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHRNA4P43681 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms