Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
NCAPD3P42695 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC28.66■■■□□ 2.18
NCAPD3P42695 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
NCAPD3P42695 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
NCAPD3P42695 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
NCAPD3P42695 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
NCAPD3P42695 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
NCAPD3P42695 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC28.66■■■□□ 2.18
NCAPD3P42695 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
NCAPD3P42695 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC28.66■■■□□ 2.18
NCAPD3P42695 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC28.66■■■□□ 2.18
NCAPD3P42695 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC28.66■■■□□ 2.18
NCAPD3P42695 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC28.66■■■□□ 2.18
NCAPD3P42695 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC28.66■■■□□ 2.18
NCAPD3P42695 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
NCAPD3P42695 AP006547.1-201ENST00000563435 692 ntBASIC28.66■■■□□ 2.18
NCAPD3P42695 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
NCAPD3P42695 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC28.66■■■□□ 2.18
NCAPD3P42695 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
NCAPD3P42695 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
NCAPD3P42695 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC28.66■■■□□ 2.18
NCAPD3P42695 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC28.66■■■□□ 2.18
NCAPD3P42695 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC28.66■■■□□ 2.18
NCAPD3P42695 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
NCAPD3P42695 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
NCAPD3P42695 TARDBPP1-201ENST00000442013 1203 ntBASIC28.65■■■□□ 2.18
NCAPD3P42695 REEP1-202ENST00000453231 940 ntTSL 2 BASIC28.65■■■□□ 2.18
NCAPD3P42695 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC28.65■■■□□ 2.18
NCAPD3P42695 MIR4706-201ENST00000582134 82 ntBASIC28.65■■■□□ 2.18
NCAPD3P42695 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
NCAPD3P42695 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
NCAPD3P42695 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
NCAPD3P42695 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC28.64■■■□□ 2.18
NCAPD3P42695 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC28.64■■■□□ 2.18
NCAPD3P42695 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
NCAPD3P42695 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC28.64■■■□□ 2.18
NCAPD3P42695 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
NCAPD3P42695 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
NCAPD3P42695 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
NCAPD3P42695 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
NCAPD3P42695 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC28.64■■■□□ 2.17
NCAPD3P42695 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
NCAPD3P42695 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
NCAPD3P42695 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
NCAPD3P42695 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
NCAPD3P42695 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
NCAPD3P42695 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
NCAPD3P42695 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
NCAPD3P42695 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC28.63■■■□□ 2.17
NCAPD3P42695 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC28.63■■■□□ 2.17
NCAPD3P42695 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
NCAPD3P42695 AC006001.1-201ENST00000325130 474 ntBASIC28.63■■■□□ 2.17
NCAPD3P42695 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
NCAPD3P42695 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
NCAPD3P42695 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC28.63■■■□□ 2.17
NCAPD3P42695 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC28.63■■■□□ 2.17
NCAPD3P42695 ADM-202ENST00000524948 584 ntTSL 2 BASIC28.63■■■□□ 2.17
NCAPD3P42695 AC025279.2-201ENST00000569730 653 ntBASIC28.63■■■□□ 2.17
NCAPD3P42695 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC28.63■■■□□ 2.17
NCAPD3P42695 METTL26-214ENST00000614890 801 ntTSL 3 BASIC28.63■■■□□ 2.17
NCAPD3P42695 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC28.62■■■□□ 2.17
NCAPD3P42695 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
NCAPD3P42695 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
NCAPD3P42695 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC28.62■■■□□ 2.17
NCAPD3P42695 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
NCAPD3P42695 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
NCAPD3P42695 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC28.62■■■□□ 2.17
NCAPD3P42695 GGCT-203ENST00000409144 836 ntTSL 2 BASIC28.62■■■□□ 2.17
NCAPD3P42695 NUS1P3-201ENST00000423502 862 ntBASIC28.62■■■□□ 2.17
NCAPD3P42695 HIST2H2BC-201ENST00000498492 580 ntBASIC28.62■■■□□ 2.17
NCAPD3P42695 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
NCAPD3P42695 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
NCAPD3P42695 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC28.62■■■□□ 2.17
NCAPD3P42695 HCG18-245ENST00000602550 559 ntTSL 4 BASIC28.62■■■□□ 2.17
NCAPD3P42695 AC244452.3-201ENST00000636814 210 ntBASIC28.62■■■□□ 2.17
NCAPD3P42695 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC28.62■■■□□ 2.17
NCAPD3P42695 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
NCAPD3P42695 BOC-212ENST00000485230 2173 ntTSL 2 BASIC28.62■■■□□ 2.17
NCAPD3P42695 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
NCAPD3P42695 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
NCAPD3P42695 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
NCAPD3P42695 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC28.61■■■□□ 2.17
NCAPD3P42695 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
NCAPD3P42695 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
NCAPD3P42695 HINT2P1-201ENST00000419438 481 ntBASIC28.61■■■□□ 2.17
NCAPD3P42695 VDAC1P7-201ENST00000462417 847 ntBASIC28.61■■■□□ 2.17
NCAPD3P42695 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC28.61■■■□□ 2.17
NCAPD3P42695 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC28.61■■■□□ 2.17
NCAPD3P42695 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC28.61■■■□□ 2.17
NCAPD3P42695 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC28.61■■■□□ 2.17
NCAPD3P42695 AC092053.1-201ENST00000605787 1936 ntBASIC28.61■■■□□ 2.17
NCAPD3P42695 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC28.61■■■□□ 2.17
NCAPD3P42695 GRN-214ENST00000589265 1632 ntTSL 5 BASIC28.61■■■□□ 2.17
NCAPD3P42695 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
NCAPD3P42695 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC28.61■■■□□ 2.17
NCAPD3P42695 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
NCAPD3P42695 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC28.6■■■□□ 2.17
NCAPD3P42695 PCDHB17P-201ENST00000539533 2393 ntBASIC28.6■■■□□ 2.17
NCAPD3P42695 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
NCAPD3P42695 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms