Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN6P29350 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN6P29350 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.77■□□□□ 0.12
PTPN6P29350 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN6P29350 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
PTPN6P29350 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN6P29350 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
PTPN6P29350 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN6P29350 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN6P29350 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN6P29350 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN6P29350 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN6P29350 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
PTPN6P29350 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN6P29350 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
PTPN6P29350 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN6P29350 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN6P29350 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN6P29350 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.77■□□□□ 0.12
PTPN6P29350 PMS2P1-201ENST00000431037 1228 ntBASIC15.77■□□□□ 0.12
PTPN6P29350 AP000347.1-202ENST00000435868 847 ntBASIC15.77■□□□□ 0.12
PTPN6P29350 AC098831.1-202ENST00000438821 336 ntBASIC15.77■□□□□ 0.12
PTPN6P29350 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.77■□□□□ 0.12
PTPN6P29350 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.77■□□□□ 0.12
PTPN6P29350 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN6P29350 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN6P29350 IGHV3-22-201ENST00000520721 359 ntBASIC15.77■□□□□ 0.12
PTPN6P29350 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN6P29350 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.77■□□□□ 0.12
PTPN6P29350 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.77■□□□□ 0.12
PTPN6P29350 AC091167.2-201ENST00000579581 588 ntBASIC15.77■□□□□ 0.12
PTPN6P29350 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PTPN6P29350 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
PTPN6P29350 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.77■□□□□ 0.12
PTPN6P29350 AF228730.7-201ENST00000641842 219 ntBASIC15.77■□□□□ 0.12
PTPN6P29350 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN6P29350 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
PTPN6P29350 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTPN6P29350 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.77■□□□□ 0.11
PTPN6P29350 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTPN6P29350 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTPN6P29350 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.77■□□□□ 0.11
PTPN6P29350 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTPN6P29350 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTPN6P29350 AC131009.4-201ENST00000624048 1740 ntBASIC15.77■□□□□ 0.11
PTPN6P29350 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.11
PTPN6P29350 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN6P29350 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN6P29350 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN6P29350 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.76■□□□□ 0.11
PTPN6P29350 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN6P29350 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN6P29350 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN6P29350 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN6P29350 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.76■□□□□ 0.11
PTPN6P29350 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN6P29350 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN6P29350 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN6P29350 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN6P29350 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.76■□□□□ 0.11
PTPN6P29350 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.76■□□□□ 0.11
PTPN6P29350 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN6P29350 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.76■□□□□ 0.11
PTPN6P29350 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.76■□□□□ 0.11
PTPN6P29350 SLC25A1P1-201ENST00000528351 927 ntBASIC15.76■□□□□ 0.11
PTPN6P29350 AC107918.2-201ENST00000530817 355 ntBASIC15.76■□□□□ 0.11
PTPN6P29350 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.76■□□□□ 0.11
PTPN6P29350 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN6P29350 AL356488.2-201ENST00000602755 427 ntBASIC15.76■□□□□ 0.11
PTPN6P29350 MIR1199-201ENST00000621445 119 ntBASIC15.76■□□□□ 0.11
PTPN6P29350 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.76■□□□□ 0.11
PTPN6P29350 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.76■□□□□ 0.11
PTPN6P29350 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
PTPN6P29350 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.76■□□□□ 0.11
PTPN6P29350 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PTPN6P29350 AC006449.6-201ENST00000612330 2296 ntBASIC15.76■□□□□ 0.11
PTPN6P29350 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN6P29350 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.76■□□□□ 0.11
PTPN6P29350 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN6P29350 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN6P29350 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN6P29350 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN6P29350 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
PTPN6P29350 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN6P29350 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.76■□□□□ 0.11
PTPN6P29350 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN6P29350 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN6P29350 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.76■□□□□ 0.11
PTPN6P29350 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN6P29350 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN6P29350 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN6P29350 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN6P29350 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN6P29350 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN6P29350 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN6P29350 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PTPN6P29350 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN6P29350 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN6P29350 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
PTPN6P29350 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms