Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LMO1P25800 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LMO1P25800 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.96□□□□□ -0.18
LMO1P25800 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.96□□□□□ -0.18
LMO1P25800 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.96□□□□□ -0.18
LMO1P25800 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LMO1P25800 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LMO1P25800 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LMO1P25800 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.95□□□□□ -0.18
LMO1P25800 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LMO1P25800 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LMO1P25800 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.95□□□□□ -0.18
LMO1P25800 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LMO1P25800 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LMO1P25800 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LMO1P25800 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.95□□□□□ -0.18
LMO1P25800 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LMO1P25800 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LMO1P25800 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LMO1P25800 MRPL3P1-201ENST00000400109 1033 ntBASIC13.95□□□□□ -0.18
LMO1P25800 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.95□□□□□ -0.18
LMO1P25800 AC098831.1-202ENST00000438821 336 ntBASIC13.95□□□□□ -0.18
LMO1P25800 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.95□□□□□ -0.18
LMO1P25800 AC108751.1-201ENST00000490852 363 ntBASIC13.95□□□□□ -0.18
LMO1P25800 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.95□□□□□ -0.18
LMO1P25800 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.95□□□□□ -0.18
LMO1P25800 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.95□□□□□ -0.18
LMO1P25800 AP001005.1-201ENST00000571755 1248 ntBASIC13.95□□□□□ -0.18
LMO1P25800 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.95□□□□□ -0.18
LMO1P25800 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LMO1P25800 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LMO1P25800 AC020765.3-201ENST00000613051 740 ntBASIC13.95□□□□□ -0.18
LMO1P25800 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
LMO1P25800 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LMO1P25800 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LMO1P25800 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LMO1P25800 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LMO1P25800 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LMO1P25800 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
LMO1P25800 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
LMO1P25800 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LMO1P25800 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LMO1P25800 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LMO1P25800 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
LMO1P25800 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LMO1P25800 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LMO1P25800 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LMO1P25800 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.94□□□□□ -0.18
LMO1P25800 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LMO1P25800 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LMO1P25800 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LMO1P25800 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LMO1P25800 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.94□□□□□ -0.18
LMO1P25800 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.94□□□□□ -0.18
LMO1P25800 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LMO1P25800 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LMO1P25800 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LMO1P25800 POU5F1P6-201ENST00000466990 990 ntBASIC13.94□□□□□ -0.18
LMO1P25800 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.94□□□□□ -0.18
LMO1P25800 IGHV3-22-201ENST00000520721 359 ntBASIC13.94□□□□□ -0.18
LMO1P25800 UNC93B6-202ENST00000528242 690 ntBASIC13.94□□□□□ -0.18
LMO1P25800 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
LMO1P25800 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.94□□□□□ -0.18
LMO1P25800 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.94□□□□□ -0.18
LMO1P25800 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.94□□□□□ -0.18
LMO1P25800 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.94□□□□□ -0.18
LMO1P25800 MIR3909-201ENST00000579518 119 ntBASIC13.94□□□□□ -0.18
LMO1P25800 SLC25A6P4-201ENST00000586535 553 ntBASIC13.94□□□□□ -0.18
LMO1P25800 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.94□□□□□ -0.18
LMO1P25800 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.94□□□□□ -0.18
LMO1P25800 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.94□□□□□ -0.18
LMO1P25800 AL645728.2-201ENST00000641974 660 ntBASIC13.94□□□□□ -0.18
LMO1P25800 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LMO1P25800 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.94□□□□□ -0.18
LMO1P25800 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LMO1P25800 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LMO1P25800 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.94□□□□□ -0.18
LMO1P25800 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.94□□□□□ -0.18
LMO1P25800 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LMO1P25800 OR6D1P-203ENST00000641209 4860 ntBASIC13.94□□□□□ -0.18
LMO1P25800 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LMO1P25800 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.94□□□□□ -0.18
LMO1P25800 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LMO1P25800 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LMO1P25800 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
LMO1P25800 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LMO1P25800 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LMO1P25800 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.93□□□□□ -0.18
LMO1P25800 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.93□□□□□ -0.18
LMO1P25800 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LMO1P25800 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LMO1P25800 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LMO1P25800 PCGF3-213ENST00000620529 1899 ntBASIC13.93□□□□□ -0.18
LMO1P25800 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LMO1P25800 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.93□□□□□ -0.18
LMO1P25800 AL662844.4-201ENST00000606367 2838 ntBASIC13.93□□□□□ -0.18
LMO1P25800 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LMO1P25800 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LMO1P25800 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LMO1P25800 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms