Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL1P22362 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL1P22362 AL139384.1-201ENST00000612143 3047 ntBASIC14.26□□□□□ -0.13
CCL1P22362 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL1P22362 LINC02447-202ENST00000501888 2146 ntBASIC14.26□□□□□ -0.13
CCL1P22362 AC010491.1-201ENST00000563101 2797 ntBASIC14.26□□□□□ -0.13
CCL1P22362 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL1P22362 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL1P22362 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.26□□□□□ -0.13
CCL1P22362 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL1P22362 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL1P22362 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.26□□□□□ -0.13
CCL1P22362 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.26□□□□□ -0.13
CCL1P22362 PMS2P4-201ENST00000412466 1052 ntBASIC14.26□□□□□ -0.13
CCL1P22362 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL1P22362 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL1P22362 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.26□□□□□ -0.13
CCL1P22362 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.26□□□□□ -0.13
CCL1P22362 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.26□□□□□ -0.13
CCL1P22362 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.26□□□□□ -0.13
CCL1P22362 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL1P22362 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCL1P22362 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CCL1P22362 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.26□□□□□ -0.13
CCL1P22362 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL1P22362 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL1P22362 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.26□□□□□ -0.13
CCL1P22362 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCL1P22362 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.26□□□□□ -0.13
CCL1P22362 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
CCL1P22362 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
CCL1P22362 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CCL1P22362 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
CCL1P22362 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CCL1P22362 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.25□□□□□ -0.13
CCL1P22362 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL1P22362 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CCL1P22362 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.25□□□□□ -0.13
CCL1P22362 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.25□□□□□ -0.13
CCL1P22362 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCL1P22362 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CCL1P22362 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL1P22362 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL1P22362 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.25□□□□□ -0.13
CCL1P22362 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
CCL1P22362 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CCL1P22362 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
CCL1P22362 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCL1P22362 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL1P22362 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL1P22362 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CCL1P22362 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.25□□□□□ -0.13
CCL1P22362 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.25□□□□□ -0.13
CCL1P22362 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCL1P22362 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL1P22362 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL1P22362 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.25□□□□□ -0.13
CCL1P22362 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL1P22362 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.25□□□□□ -0.13
CCL1P22362 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.25□□□□□ -0.13
CCL1P22362 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL1P22362 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.25□□□□□ -0.13
CCL1P22362 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCL1P22362 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.25□□□□□ -0.13
CCL1P22362 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL1P22362 AL031432.2-201ENST00000566714 459 ntBASIC14.25□□□□□ -0.13
CCL1P22362 AL928711.1-201ENST00000570165 459 ntBASIC14.25□□□□□ -0.13
CCL1P22362 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.25□□□□□ -0.13
CCL1P22362 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.25□□□□□ -0.13
CCL1P22362 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.25□□□□□ -0.13
CCL1P22362 AC148477.8-201ENST00000624298 468 ntBASIC14.25□□□□□ -0.13
CCL1P22362 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.25□□□□□ -0.13
CCL1P22362 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCL1P22362 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.25□□□□□ -0.13
CCL1P22362 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.25□□□□□ -0.13
CCL1P22362 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CCL1P22362 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CCL1P22362 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.25□□□□□ -0.13
CCL1P22362 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL1P22362 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.25□□□□□ -0.13
CCL1P22362 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.25□□□□□ -0.13
CCL1P22362 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CCL1P22362 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CCL1P22362 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL1P22362 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL1P22362 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCL1P22362 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL1P22362 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL1P22362 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.25□□□□□ -0.13
CCL1P22362 U82695.1-201ENST00000635752 1889 ntBASIC14.25□□□□□ -0.13
CCL1P22362 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL1P22362 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCL1P22362 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL1P22362 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL1P22362 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL1P22362 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL1P22362 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CCL1P22362 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL1P22362 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CCL1P22362 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms