Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2B1P20020 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.17■□□□□ 0.66
ATP2B1P20020 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ATP2B1P20020 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP2B1P20020 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP2B1P20020 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2B1P20020 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP2B1P20020 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.17■□□□□ 0.66
ATP2B1P20020 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2B1P20020 CYP2A7P1-201ENST00000595391 815 ntBASIC19.17■□□□□ 0.66
ATP2B1P20020 Z83851.2-201ENST00000609564 659 ntBASIC19.17■□□□□ 0.66
ATP2B1P20020 ACTL9-202ENST00000612068 1252 ntBASIC19.17■□□□□ 0.66
ATP2B1P20020 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.17■□□□□ 0.66
ATP2B1P20020 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.17■□□□□ 0.66
ATP2B1P20020 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2B1P20020 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.17■□□□□ 0.66
ATP2B1P20020 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ATP2B1P20020 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2B1P20020 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2B1P20020 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
ATP2B1P20020 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2B1P20020 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2B1P20020 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP2B1P20020 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2B1P20020 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2B1P20020 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2B1P20020 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2B1P20020 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.17■□□□□ 0.66
ATP2B1P20020 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP2B1P20020 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B1P20020 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B1P20020 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B1P20020 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ATP2B1P20020 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B1P20020 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B1P20020 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B1P20020 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B1P20020 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B1P20020 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B1P20020 AC006538.1-201ENST00000567905 1585 ntBASIC19.16■□□□□ 0.66
ATP2B1P20020 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B1P20020 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ATP2B1P20020 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.16■□□□□ 0.66
ATP2B1P20020 AC007967.2-201ENST00000432613 625 ntBASIC19.16■□□□□ 0.66
ATP2B1P20020 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.16■□□□□ 0.66
ATP2B1P20020 FAM185BP-201ENST00000443595 716 ntBASIC19.16■□□□□ 0.66
ATP2B1P20020 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.16■□□□□ 0.66
ATP2B1P20020 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.16■□□□□ 0.66
ATP2B1P20020 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.16■□□□□ 0.66
ATP2B1P20020 SLC25A1P1-201ENST00000528351 927 ntBASIC19.16■□□□□ 0.66
ATP2B1P20020 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.16■□□□□ 0.66
ATP2B1P20020 AC120114.3-201ENST00000611923 658 ntBASIC19.16■□□□□ 0.66
ATP2B1P20020 BX640515.1-201ENST00000617215 977 ntBASIC19.16■□□□□ 0.66
ATP2B1P20020 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.16■□□□□ 0.66
ATP2B1P20020 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B1P20020 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B1P20020 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B1P20020 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ATP2B1P20020 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.16■□□□□ 0.66
ATP2B1P20020 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B1P20020 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B1P20020 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B1P20020 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ATP2B1P20020 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
ATP2B1P20020 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B1P20020 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B1P20020 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B1P20020 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ATP2B1P20020 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B1P20020 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ATP2B1P20020 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B1P20020 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.15■□□□□ 0.66
ATP2B1P20020 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B1P20020 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B1P20020 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B1P20020 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B1P20020 IGLL3P-201ENST00000412472 434 ntBASIC19.15■□□□□ 0.66
ATP2B1P20020 PRSS29P-201ENST00000440800 595 ntBASIC19.15■□□□□ 0.66
ATP2B1P20020 CXCL1P1-201ENST00000502804 216 ntBASIC19.15■□□□□ 0.66
ATP2B1P20020 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.15■□□□□ 0.66
ATP2B1P20020 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B1P20020 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.15■□□□□ 0.66
ATP2B1P20020 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.15■□□□□ 0.66
ATP2B1P20020 AC091167.2-201ENST00000579581 588 ntBASIC19.15■□□□□ 0.66
ATP2B1P20020 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B1P20020 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
ATP2B1P20020 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B1P20020 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B1P20020 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B1P20020 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B1P20020 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B1P20020 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B1P20020 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC19.15■□□□□ 0.66
ATP2B1P20020 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B1P20020 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B1P20020 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B1P20020 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.15■□□□□ 0.66
ATP2B1P20020 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B1P20020 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.66
ATP2B1P20020 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms