Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM21P19474 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM21P19474 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
TRIM21P19474 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.36■□□□□ 0.53
TRIM21P19474 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM21P19474 FDX1P1-201ENST00000449115 551 ntBASIC18.36■□□□□ 0.53
TRIM21P19474 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.36■□□□□ 0.53
TRIM21P19474 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM21P19474 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
TRIM21P19474 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM21P19474 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM21P19474 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
TRIM21P19474 AL590787.1-201ENST00000568856 1315 ntBASIC18.36■□□□□ 0.53
TRIM21P19474 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM21P19474 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM21P19474 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM21P19474 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.36■□□□□ 0.53
TRIM21P19474 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM21P19474 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM21P19474 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.36■□□□□ 0.53
TRIM21P19474 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TRIM21P19474 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM21P19474 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM21P19474 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM21P19474 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM21P19474 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TRIM21P19474 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM21P19474 AC006277.1-201ENST00000624348 1610 ntBASIC18.35■□□□□ 0.53
TRIM21P19474 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM21P19474 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TRIM21P19474 AL162727.3-201ENST00000635661 2787 ntBASIC18.35■□□□□ 0.53
TRIM21P19474 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM21P19474 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TRIM21P19474 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM21P19474 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
TRIM21P19474 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM21P19474 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM21P19474 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM21P19474 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM21P19474 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM21P19474 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM21P19474 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM21P19474 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.35■□□□□ 0.53
TRIM21P19474 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM21P19474 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.35■□□□□ 0.53
TRIM21P19474 TERC-201ENST00000602385 541 ntBASIC18.35■□□□□ 0.53
TRIM21P19474 AL356488.2-201ENST00000602755 427 ntBASIC18.35■□□□□ 0.53
TRIM21P19474 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM21P19474 GGTLC5P-201ENST00000617623 998 ntBASIC18.35■□□□□ 0.53
TRIM21P19474 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM21P19474 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.35■□□□□ 0.53
TRIM21P19474 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM21P19474 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM21P19474 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM21P19474 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRIM21P19474 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM21P19474 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM21P19474 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TRIM21P19474 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRIM21P19474 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM21P19474 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM21P19474 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRIM21P19474 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM21P19474 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM21P19474 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.35■□□□□ 0.53
TRIM21P19474 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM21P19474 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM21P19474 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM21P19474 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM21P19474 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
TRIM21P19474 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM21P19474 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM21P19474 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM21P19474 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TRIM21P19474 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM21P19474 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM21P19474 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM21P19474 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM21P19474 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM21P19474 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM21P19474 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM21P19474 HLA-A-201ENST00000376802 1334 ntBASIC18.34■□□□□ 0.53
TRIM21P19474 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TRIM21P19474 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM21P19474 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM21P19474 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM21P19474 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRIM21P19474 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TRIM21P19474 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.34■□□□□ 0.53
TRIM21P19474 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.34■□□□□ 0.53
TRIM21P19474 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM21P19474 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.34■□□□□ 0.53
TRIM21P19474 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.34■□□□□ 0.53
TRIM21P19474 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
TRIM21P19474 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM21P19474 AC013467.2-201ENST00000605472 835 ntBASIC18.34■□□□□ 0.53
TRIM21P19474 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM21P19474 AC148477.8-201ENST00000624298 468 ntBASIC18.34■□□□□ 0.53
TRIM21P19474 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
TRIM21P19474 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms