Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDGFRAP16234 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDGFRAP16234 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDGFRAP16234 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PDGFRAP16234 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PDGFRAP16234 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDGFRAP16234 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.41■□□□□ 0.38
PDGFRAP16234 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.41■□□□□ 0.38
PDGFRAP16234 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PDGFRAP16234 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.41■□□□□ 0.38
PDGFRAP16234 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.41■□□□□ 0.38
PDGFRAP16234 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.41■□□□□ 0.38
PDGFRAP16234 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDGFRAP16234 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
PDGFRAP16234 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.41■□□□□ 0.38
PDGFRAP16234 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PDGFRAP16234 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PDGFRAP16234 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PDGFRAP16234 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDGFRAP16234 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDGFRAP16234 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.41■□□□□ 0.38
PDGFRAP16234 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.41■□□□□ 0.38
PDGFRAP16234 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.41■□□□□ 0.38
PDGFRAP16234 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDGFRAP16234 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDGFRAP16234 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.41■□□□□ 0.38
PDGFRAP16234 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDGFRAP16234 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PDGFRAP16234 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFRAP16234 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PDGFRAP16234 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.4■□□□□ 0.38
PDGFRAP16234 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFRAP16234 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.4■□□□□ 0.38
PDGFRAP16234 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFRAP16234 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFRAP16234 AC006449.5-201ENST00000610658 2098 ntBASIC17.4■□□□□ 0.38
PDGFRAP16234 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFRAP16234 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.4■□□□□ 0.38
PDGFRAP16234 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.4■□□□□ 0.38
PDGFRAP16234 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PDGFRAP16234 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFRAP16234 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFRAP16234 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFRAP16234 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.4■□□□□ 0.38
PDGFRAP16234 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFRAP16234 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.4■□□□□ 0.38
PDGFRAP16234 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.4■□□□□ 0.38
PDGFRAP16234 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.4■□□□□ 0.38
PDGFRAP16234 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.4■□□□□ 0.38
PDGFRAP16234 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.4■□□□□ 0.38
PDGFRAP16234 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.4■□□□□ 0.38
PDGFRAP16234 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.4■□□□□ 0.38
PDGFRAP16234 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.4■□□□□ 0.38
PDGFRAP16234 MIR3909-201ENST00000579518 119 ntBASIC17.4■□□□□ 0.38
PDGFRAP16234 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.4■□□□□ 0.38
PDGFRAP16234 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.4■□□□□ 0.38
PDGFRAP16234 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.4■□□□□ 0.38
PDGFRAP16234 AC021097.1-201ENST00000607902 574 ntBASIC17.4■□□□□ 0.38
PDGFRAP16234 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.4■□□□□ 0.38
PDGFRAP16234 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PDGFRAP16234 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFRAP16234 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PDGFRAP16234 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFRAP16234 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFRAP16234 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFRAP16234 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFRAP16234 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.4■□□□□ 0.38
PDGFRAP16234 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PDGFRAP16234 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.4■□□□□ 0.38
PDGFRAP16234 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFRAP16234 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFRAP16234 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFRAP16234 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDGFRAP16234 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PDGFRAP16234 PCGF3-213ENST00000620529 1899 ntBASIC17.39■□□□□ 0.38
PDGFRAP16234 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
PDGFRAP16234 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PDGFRAP16234 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
PDGFRAP16234 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFRAP16234 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PDGFRAP16234 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFRAP16234 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFRAP16234 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFRAP16234 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PDGFRAP16234 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFRAP16234 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFRAP16234 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFRAP16234 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFRAP16234 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDGFRAP16234 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.39■□□□□ 0.37
PDGFRAP16234 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.39■□□□□ 0.37
PDGFRAP16234 MIR1233-2-201ENST00000408138 82 ntBASIC17.39■□□□□ 0.37
PDGFRAP16234 MIR1233-1-201ENST00000408722 82 ntBASIC17.39■□□□□ 0.37
PDGFRAP16234 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.39■□□□□ 0.37
PDGFRAP16234 DNAJB3-201ENST00000446806 729 ntBASIC17.39■□□□□ 0.37
PDGFRAP16234 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.39■□□□□ 0.37
PDGFRAP16234 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.39■□□□□ 0.37
PDGFRAP16234 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.39■□□□□ 0.37
PDGFRAP16234 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.39■□□□□ 0.37
PDGFRAP16234 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms