Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 AC132938.5-201ENST00000624980 1813 ntBASIC17.24■□□□□ 0.35
H2AFXP16104 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
H2AFXP16104 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.23■□□□□ 0.35
H2AFXP16104 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.23■□□□□ 0.35
H2AFXP16104 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
H2AFXP16104 AL135905.2-201ENST00000584934 1404 ntBASIC17.23■□□□□ 0.35
H2AFXP16104 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
H2AFXP16104 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2AFXP16104 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
H2AFXP16104 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
H2AFXP16104 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2AFXP16104 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.23■□□□□ 0.35
H2AFXP16104 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.23■□□□□ 0.35
H2AFXP16104 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.23■□□□□ 0.35
H2AFXP16104 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2AFXP16104 RPPH1-201ENST00000516869 333 ntBASIC17.23■□□□□ 0.35
H2AFXP16104 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.23■□□□□ 0.35
H2AFXP16104 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2AFXP16104 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.23■□□□□ 0.35
H2AFXP16104 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2AFXP16104 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.23■□□□□ 0.35
H2AFXP16104 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2AFXP16104 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.23■□□□□ 0.35
H2AFXP16104 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
H2AFXP16104 AC090616.6-203ENST00000579186 1945 ntBASIC17.23■□□□□ 0.35
H2AFXP16104 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
H2AFXP16104 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2AFXP16104 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC17.23■□□□□ 0.35
H2AFXP16104 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2AFXP16104 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
H2AFXP16104 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2AFXP16104 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
H2AFXP16104 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.22■□□□□ 0.35
H2AFXP16104 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC17.22■□□□□ 0.35
H2AFXP16104 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 ARHGAP23P1-201ENST00000562773 1937 ntBASIC17.22■□□□□ 0.35
H2AFXP16104 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.22■□□□□ 0.35
H2AFXP16104 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
H2AFXP16104 RPS2P55-201ENST00000397318 883 ntBASIC17.22■□□□□ 0.35
H2AFXP16104 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.22■□□□□ 0.35
H2AFXP16104 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.22■□□□□ 0.35
H2AFXP16104 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.22■□□□□ 0.35
H2AFXP16104 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.22■□□□□ 0.35
H2AFXP16104 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
H2AFXP16104 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 AC008677.1-201ENST00000519230 1561 ntBASIC17.22■□□□□ 0.35
H2AFXP16104 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
H2AFXP16104 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.22■□□□□ 0.35
H2AFXP16104 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
H2AFXP16104 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2AFXP16104 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC17.22■□□□□ 0.35
H2AFXP16104 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
H2AFXP16104 KRT8P39-201ENST00000396270 1433 ntBASIC17.21■□□□□ 0.35
H2AFXP16104 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC17.21■□□□□ 0.35
H2AFXP16104 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
H2AFXP16104 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.21■□□□□ 0.35
H2AFXP16104 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H2AFXP16104 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
H2AFXP16104 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H2AFXP16104 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
H2AFXP16104 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
H2AFXP16104 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H2AFXP16104 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
H2AFXP16104 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
H2AFXP16104 OS9-204ENST00000389146 2091 ntTSL 2 BASIC17.21■□□□□ 0.35
H2AFXP16104 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.21■□□□□ 0.35
H2AFXP16104 GPAA1P2-202ENST00000606848 1787 ntBASIC17.21■□□□□ 0.35
H2AFXP16104 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.21■□□□□ 0.35
H2AFXP16104 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms