Protein–RNA interactions for Protein: P15923

TCF3, Transcription factor E2-alpha, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3P15923 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.15■□□□□ 0.34
TCF3P15923 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.15■□□□□ 0.34
TCF3P15923 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCF3P15923 AC092053.1-201ENST00000605787 1936 ntBASIC17.15■□□□□ 0.34
TCF3P15923 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TCF3P15923 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCF3P15923 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TCF3P15923 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCF3P15923 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCF3P15923 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.15■□□□□ 0.34
TCF3P15923 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TCF3P15923 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.14■□□□□ 0.33
TCF3P15923 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.14■□□□□ 0.33
TCF3P15923 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCF3P15923 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCF3P15923 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TCF3P15923 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
TCF3P15923 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TCF3P15923 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.14■□□□□ 0.33
TCF3P15923 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.14■□□□□ 0.33
TCF3P15923 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCF3P15923 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCF3P15923 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCF3P15923 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.14■□□□□ 0.33
TCF3P15923 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TCF3P15923 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.14■□□□□ 0.33
TCF3P15923 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.14■□□□□ 0.33
TCF3P15923 FAM220BP-201ENST00000377689 816 ntBASIC17.14■□□□□ 0.33
TCF3P15923 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.14■□□□□ 0.33
TCF3P15923 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.14■□□□□ 0.33
TCF3P15923 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.14■□□□□ 0.33
TCF3P15923 AC097493.3-201ENST00000509725 367 ntBASIC17.14■□□□□ 0.33
TCF3P15923 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.14■□□□□ 0.33
TCF3P15923 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.14■□□□□ 0.33
TCF3P15923 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.14■□□□□ 0.33
TCF3P15923 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.14■□□□□ 0.33
TCF3P15923 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.14■□□□□ 0.33
TCF3P15923 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.14■□□□□ 0.33
TCF3P15923 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCF3P15923 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCF3P15923 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TCF3P15923 AC022211.2-201ENST00000585075 2527 ntBASIC17.14■□□□□ 0.33
TCF3P15923 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.14■□□□□ 0.33
TCF3P15923 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCF3P15923 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.14■□□□□ 0.33
TCF3P15923 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCF3P15923 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TCF3P15923 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCF3P15923 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCF3P15923 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TCF3P15923 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCF3P15923 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCF3P15923 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TCF3P15923 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TCF3P15923 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TCF3P15923 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.13■□□□□ 0.33
TCF3P15923 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCF3P15923 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.13■□□□□ 0.33
TCF3P15923 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.13■□□□□ 0.33
TCF3P15923 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCF3P15923 HLA-H-201ENST00000383620 1096 ntBASIC17.13■□□□□ 0.33
TCF3P15923 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.13■□□□□ 0.33
TCF3P15923 AC092580.3-201ENST00000430932 139 ntBASIC17.13■□□□□ 0.33
TCF3P15923 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.13■□□□□ 0.33
TCF3P15923 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.13■□□□□ 0.33
TCF3P15923 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TCF3P15923 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.13■□□□□ 0.33
TCF3P15923 MIR4453-201ENST00000584019 89 ntBASIC17.13■□□□□ 0.33
TCF3P15923 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.13■□□□□ 0.33
TCF3P15923 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
TCF3P15923 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.13■□□□□ 0.33
TCF3P15923 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCF3P15923 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
TCF3P15923 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.13■□□□□ 0.33
TCF3P15923 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TCF3P15923 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.13■□□□□ 0.33
TCF3P15923 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCF3P15923 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCF3P15923 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCF3P15923 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCF3P15923 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.12■□□□□ 0.33
TCF3P15923 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCF3P15923 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.12■□□□□ 0.33
TCF3P15923 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TCF3P15923 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCF3P15923 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCF3P15923 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCF3P15923 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TCF3P15923 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TCF3P15923 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCF3P15923 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TCF3P15923 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TCF3P15923 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TCF3P15923 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.12■□□□□ 0.33
TCF3P15923 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCF3P15923 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TCF3P15923 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.12■□□□□ 0.33
TCF3P15923 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.12■□□□□ 0.33
TCF3P15923 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCF3P15923 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms