Protein–RNA interactions for Protein: P0C7M3

SFTA3, Surfactant-associated protein 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTA3P0C7M3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SFTA3P0C7M3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.33□□□□□ -0.27
SFTA3P0C7M3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
SFTA3P0C7M3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 TSPY7P-201ENST00000431358 1114 ntBASIC13.33□□□□□ -0.28
SFTA3P0C7M3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 HLA-J-202ENST00000469281 1241 ntBASIC13.33□□□□□ -0.28
SFTA3P0C7M3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 AP003071.4-201ENST00000562276 1284 ntBASIC13.33□□□□□ -0.28
SFTA3P0C7M3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 AC008687.5-201ENST00000593746 558 ntBASIC13.33□□□□□ -0.28
SFTA3P0C7M3 DGCR10-201ENST00000609839 495 ntBASIC13.33□□□□□ -0.28
SFTA3P0C7M3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTA3P0C7M3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 MIR718-201ENST00000390190 70 ntBASIC13.32□□□□□ -0.28
SFTA3P0C7M3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.32□□□□□ -0.28
SFTA3P0C7M3 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms