Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.41■□□□□ 0.38
RB1P06400 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.41■□□□□ 0.38
RB1P06400 AL109936.8-201ENST00000641772 604 ntBASIC17.41■□□□□ 0.38
RB1P06400 AL139011.1-202ENST00000642063 584 ntBASIC17.41■□□□□ 0.38
RB1P06400 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RB1P06400 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RB1P06400 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RB1P06400 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RB1P06400 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
RB1P06400 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RB1P06400 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RB1P06400 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RB1P06400 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RB1P06400 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.4■□□□□ 0.38
RB1P06400 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RB1P06400 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RB1P06400 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RB1P06400 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RB1P06400 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RB1P06400 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RB1P06400 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RB1P06400 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RB1P06400 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RB1P06400 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RB1P06400 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.4■□□□□ 0.38
RB1P06400 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.4■□□□□ 0.38
RB1P06400 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.4■□□□□ 0.38
RB1P06400 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.4■□□□□ 0.38
RB1P06400 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.4■□□□□ 0.38
RB1P06400 KRT223P-202ENST00000449164 1292 ntBASIC17.4■□□□□ 0.38
RB1P06400 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.4■□□□□ 0.38
RB1P06400 AC015936.2-201ENST00000593177 259 ntBASIC17.4■□□□□ 0.38
RB1P06400 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RB1P06400 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RB1P06400 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.4■□□□□ 0.38
RB1P06400 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RB1P06400 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RB1P06400 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RB1P06400 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.4■□□□□ 0.38
RB1P06400 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RB1P06400 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RB1P06400 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RB1P06400 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RB1P06400 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RB1P06400 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RB1P06400 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
RB1P06400 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RB1P06400 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.39■□□□□ 0.37
RB1P06400 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RB1P06400 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.39■□□□□ 0.37
RB1P06400 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RB1P06400 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RB1P06400 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RB1P06400 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.39■□□□□ 0.37
RB1P06400 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RB1P06400 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RB1P06400 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.39■□□□□ 0.37
RB1P06400 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RB1P06400 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.39■□□□□ 0.37
RB1P06400 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.39■□□□□ 0.37
RB1P06400 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.39■□□□□ 0.37
RB1P06400 AL139010.1-201ENST00000454878 894 ntBASIC17.39■□□□□ 0.37
RB1P06400 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RB1P06400 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.39■□□□□ 0.37
RB1P06400 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.39■□□□□ 0.37
RB1P06400 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.39■□□□□ 0.37
RB1P06400 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.39■□□□□ 0.37
RB1P06400 MIR4259-201ENST00000584466 101 ntBASIC17.39■□□□□ 0.37
RB1P06400 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RB1P06400 AL033527.4-201ENST00000641026 673 ntBASIC17.39■□□□□ 0.37
RB1P06400 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RB1P06400 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
RB1P06400 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RB1P06400 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RB1P06400 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.39■□□□□ 0.37
RB1P06400 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.39■□□□□ 0.37
RB1P06400 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RB1P06400 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RB1P06400 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RB1P06400 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RB1P06400 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RB1P06400 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RB1P06400 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RB1P06400 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RB1P06400 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RB1P06400 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.38■□□□□ 0.37
RB1P06400 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RB1P06400 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RB1P06400 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RB1P06400 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RB1P06400 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
RB1P06400 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RB1P06400 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RB1P06400 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RB1P06400 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RB1P06400 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RB1P06400 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.38■□□□□ 0.37
RB1P06400 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RB1P06400 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RB1P06400 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms