Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHGBP05060 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.87■□□□□ 0.77
CHGBP05060 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.87■□□□□ 0.77
CHGBP05060 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.87■□□□□ 0.77
CHGBP05060 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.87■□□□□ 0.77
CHGBP05060 RN7SL589P-201ENST00000481268 310 ntBASIC19.87■□□□□ 0.77
CHGBP05060 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.87■□□□□ 0.77
CHGBP05060 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHGBP05060 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHGBP05060 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.87■□□□□ 0.77
CHGBP05060 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHGBP05060 AC008267.7-201ENST00000624570 1194 ntBASIC19.87■□□□□ 0.77
CHGBP05060 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.87■□□□□ 0.77
CHGBP05060 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.87■□□□□ 0.77
CHGBP05060 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHGBP05060 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
CHGBP05060 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHGBP05060 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.87■□□□□ 0.77
CHGBP05060 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHGBP05060 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHGBP05060 AC138932.1-201ENST00000534164 6830 ntBASIC19.87■□□□□ 0.77
CHGBP05060 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHGBP05060 ME2P1-201ENST00000426028 1970 ntBASIC19.86■□□□□ 0.77
CHGBP05060 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.86■□□□□ 0.77
CHGBP05060 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHGBP05060 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.86■□□□□ 0.77
CHGBP05060 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHGBP05060 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.86■□□□□ 0.77
CHGBP05060 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.86■□□□□ 0.77
CHGBP05060 AC023141.5-201ENST00000458585 616 ntBASIC19.86■□□□□ 0.77
CHGBP05060 KRT18P34-201ENST00000488218 1270 ntBASIC19.86■□□□□ 0.77
CHGBP05060 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.86■□□□□ 0.77
CHGBP05060 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHGBP05060 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CHGBP05060 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.86■□□□□ 0.77
CHGBP05060 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CHGBP05060 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.86■□□□□ 0.77
CHGBP05060 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHGBP05060 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CHGBP05060 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.86■□□□□ 0.77
CHGBP05060 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHGBP05060 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHGBP05060 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHGBP05060 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.86■□□□□ 0.77
CHGBP05060 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHGBP05060 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHGBP05060 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.85■□□□□ 0.77
CHGBP05060 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHGBP05060 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHGBP05060 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHGBP05060 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.85■□□□□ 0.77
CHGBP05060 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHGBP05060 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHGBP05060 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHGBP05060 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHGBP05060 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.85■□□□□ 0.77
CHGBP05060 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHGBP05060 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.85■□□□□ 0.77
CHGBP05060 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.85■□□□□ 0.77
CHGBP05060 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHGBP05060 PRYP6-201ENST00000514804 343 ntBASIC19.85■□□□□ 0.77
CHGBP05060 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.85■□□□□ 0.77
CHGBP05060 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHGBP05060 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.85■□□□□ 0.77
CHGBP05060 AC084121.4-201ENST00000641598 221 ntBASIC19.85■□□□□ 0.77
CHGBP05060 AF228730.8-201ENST00000642140 221 ntBASIC19.85■□□□□ 0.77
CHGBP05060 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.85■□□□□ 0.77
CHGBP05060 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHGBP05060 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.85■□□□□ 0.77
CHGBP05060 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHGBP05060 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHGBP05060 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHGBP05060 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
CHGBP05060 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHGBP05060 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.85■□□□□ 0.77
CHGBP05060 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.85■□□□□ 0.77
CHGBP05060 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHGBP05060 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.85■□□□□ 0.77
CHGBP05060 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHGBP05060 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
CHGBP05060 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHGBP05060 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
CHGBP05060 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHGBP05060 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
CHGBP05060 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.84■□□□□ 0.77
CHGBP05060 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHGBP05060 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHGBP05060 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHGBP05060 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
CHGBP05060 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHGBP05060 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
CHGBP05060 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.84■□□□□ 0.77
CHGBP05060 SPDYE14P-201ENST00000442619 822 ntBASIC19.84■□□□□ 0.77
CHGBP05060 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.84■□□□□ 0.77
CHGBP05060 AC093724.1-201ENST00000448659 1027 ntBASIC19.84■□□□□ 0.77
CHGBP05060 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHGBP05060 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.84■□□□□ 0.77
CHGBP05060 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.84■□□□□ 0.77
CHGBP05060 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.84■□□□□ 0.77
CHGBP05060 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms