Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.72■□□□□ 0.11
MT-ND1P03886 TP73-AS1-210ENST00000637775 1455 ntBASIC15.72■□□□□ 0.11
MT-ND1P03886 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND1P03886 AP003680.1-201ENST00000598970 3660 ntBASIC15.72■□□□□ 0.11
MT-ND1P03886 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.72■□□□□ 0.11
MT-ND1P03886 AC063926.3-201ENST00000624734 5658 ntBASIC15.72■□□□□ 0.11
MT-ND1P03886 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND1P03886 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND1P03886 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
MT-ND1P03886 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND1P03886 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.72■□□□□ 0.11
MT-ND1P03886 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
MT-ND1P03886 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND1P03886 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND1P03886 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND1P03886 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND1P03886 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
MT-ND1P03886 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND1P03886 PCED1CP-201ENST00000419887 785 ntBASIC15.72■□□□□ 0.11
MT-ND1P03886 DRAXINP1-201ENST00000437611 948 ntBASIC15.72■□□□□ 0.11
MT-ND1P03886 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.72■□□□□ 0.11
MT-ND1P03886 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.72■□□□□ 0.11
MT-ND1P03886 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.72■□□□□ 0.11
MT-ND1P03886 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.72■□□□□ 0.11
MT-ND1P03886 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.72■□□□□ 0.11
MT-ND1P03886 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
MT-ND1P03886 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.72■□□□□ 0.11
MT-ND1P03886 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.72■□□□□ 0.11
MT-ND1P03886 AL021920.2-201ENST00000624828 1351 ntBASIC15.72■□□□□ 0.11
MT-ND1P03886 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
MT-ND1P03886 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
MT-ND1P03886 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND1P03886 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
MT-ND1P03886 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND1P03886 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND1P03886 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND1P03886 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.72■□□□□ 0.11
MT-ND1P03886 LINC02228-204ENST00000642115 2962 ntBASIC15.72■□□□□ 0.11
MT-ND1P03886 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND1P03886 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MT-ND1P03886 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.71■□□□□ 0.11
MT-ND1P03886 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND1P03886 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND1P03886 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND1P03886 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND1P03886 GGT4P-201ENST00000623672 1708 ntBASIC15.71■□□□□ 0.11
MT-ND1P03886 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.71■□□□□ 0.11
MT-ND1P03886 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.71■□□□□ 0.11
MT-ND1P03886 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND1P03886 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
MT-ND1P03886 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND1P03886 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.71■□□□□ 0.11
MT-ND1P03886 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
MT-ND1P03886 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND1P03886 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND1P03886 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND1P03886 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
MT-ND1P03886 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND1P03886 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.71■□□□□ 0.11
MT-ND1P03886 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.71■□□□□ 0.11
MT-ND1P03886 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND1P03886 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.71■□□□□ 0.11
MT-ND1P03886 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.71■□□□□ 0.11
MT-ND1P03886 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.71■□□□□ 0.11
MT-ND1P03886 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.71■□□□□ 0.11
MT-ND1P03886 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.71■□□□□ 0.11
MT-ND1P03886 AL590326.2-201ENST00000625139 305 ntBASIC15.71■□□□□ 0.11
MT-ND1P03886 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
MT-ND1P03886 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND1P03886 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND1P03886 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND1P03886 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND1P03886 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND1P03886 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND1P03886 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MT-ND1P03886 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
MT-ND1P03886 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
MT-ND1P03886 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
MT-ND1P03886 AC013268.4-201ENST00000637413 2228 ntBASIC15.71■□□□□ 0.1
MT-ND1P03886 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MT-ND1P03886 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
MT-ND1P03886 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MT-ND1P03886 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
MT-ND1P03886 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
MT-ND1P03886 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND1P03886 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
MT-ND1P03886 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND1P03886 GGT3P-204ENST00000453783 1664 ntBASIC15.7■□□□□ 0.1
MT-ND1P03886 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND1P03886 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND1P03886 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.7■□□□□ 0.1
MT-ND1P03886 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.7■□□□□ 0.1
MT-ND1P03886 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.7■□□□□ 0.1
MT-ND1P03886 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.7■□□□□ 0.1
MT-ND1P03886 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND1P03886 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
MT-ND1P03886 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND1P03886 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND1P03886 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
MT-ND1P03886 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms