Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 AC005336.2-201ENST00000593183 939 ntBASIC14.36□□□□□ -0.11
HLA-DQB1P01920 AC012306.2-201ENST00000609350 630 ntBASIC14.36□□□□□ -0.11
HLA-DQB1P01920 AD001527.2-201ENST00000622994 785 ntBASIC14.36□□□□□ -0.11
HLA-DQB1P01920 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 CICP23-201ENST00000605013 2741 ntBASIC14.35□□□□□ -0.11
HLA-DQB1P01920 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 AC112907.2-201ENST00000448639 330 ntBASIC14.35□□□□□ -0.11
HLA-DQB1P01920 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 AC093827.2-201ENST00000512654 315 ntBASIC14.35□□□□□ -0.11
HLA-DQB1P01920 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 HYMAI.1-201ENST00000620949 238 ntBASIC14.35□□□□□ -0.11
HLA-DQB1P01920 AC097493.4-201ENST00000641197 219 ntBASIC14.35□□□□□ -0.11
HLA-DQB1P01920 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.35□□□□□ -0.11
HLA-DQB1P01920 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQB1P01920 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 AC092919.2-201ENST00000623631 1645 ntBASIC14.34□□□□□ -0.11
HLA-DQB1P01920 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 MIR648-201ENST00000385046 94 ntBASIC14.34□□□□□ -0.11
HLA-DQB1P01920 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 POU5F1P6-201ENST00000466990 990 ntBASIC14.34□□□□□ -0.11
HLA-DQB1P01920 RN7SL606P-201ENST00000472779 293 ntBASIC14.34□□□□□ -0.11
HLA-DQB1P01920 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 VENTXP5-201ENST00000523979 775 ntBASIC14.34□□□□□ -0.11
HLA-DQB1P01920 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 SNX33P1-201ENST00000592116 1762 ntBASIC14.34□□□□□ -0.11
HLA-DQB1P01920 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
HLA-DQB1P01920 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms