Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HLA-DRAP01903 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HLA-DRAP01903 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRAP01903 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRAP01903 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.8■□□□□ 0.44
HLA-DRAP01903 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRAP01903 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRAP01903 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
HLA-DRAP01903 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRAP01903 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRAP01903 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRAP01903 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRAP01903 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HLA-DRAP01903 AL355306.1-201ENST00000415580 579 ntBASIC17.8■□□□□ 0.44
HLA-DRAP01903 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.8■□□□□ 0.44
HLA-DRAP01903 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.8■□□□□ 0.44
HLA-DRAP01903 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRAP01903 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRAP01903 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
HLA-DRAP01903 RARRES2P8-201ENST00000566335 367 ntBASIC17.8■□□□□ 0.44
HLA-DRAP01903 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DRAP01903 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
HLA-DRAP01903 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.8■□□□□ 0.44
HLA-DRAP01903 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRAP01903 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DRAP01903 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
HLA-DRAP01903 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRAP01903 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRAP01903 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DRAP01903 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRAP01903 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
HLA-DRAP01903 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
HLA-DRAP01903 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DRAP01903 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HLA-DRAP01903 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.8■□□□□ 0.44
HLA-DRAP01903 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DRAP01903 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HLA-DRAP01903 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HLA-DRAP01903 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DRAP01903 PCDH8P1-201ENST00000428983 2773 ntBASIC17.79■□□□□ 0.44
HLA-DRAP01903 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DRAP01903 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DRAP01903 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.79■□□□□ 0.44
HLA-DRAP01903 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DRAP01903 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DRAP01903 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DRAP01903 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HLA-DRAP01903 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HLA-DRAP01903 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HLA-DRAP01903 AL671277.1-201ENST00000429656 993 ntBASIC17.79■□□□□ 0.44
HLA-DRAP01903 ADH5P3-201ENST00000433842 1137 ntBASIC17.79■□□□□ 0.44
HLA-DRAP01903 MKNK2P1-201ENST00000437526 628 ntBASIC17.79■□□□□ 0.44
HLA-DRAP01903 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HLA-DRAP01903 DNAJB3-201ENST00000446806 729 ntBASIC17.79■□□□□ 0.44
HLA-DRAP01903 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.79■□□□□ 0.44
HLA-DRAP01903 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.79■□□□□ 0.44
HLA-DRAP01903 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DRAP01903 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DRAP01903 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.79■□□□□ 0.44
HLA-DRAP01903 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
HLA-DRAP01903 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.79■□□□□ 0.44
HLA-DRAP01903 AC010327.4-202ENST00000591484 748 ntBASIC17.79■□□□□ 0.44
HLA-DRAP01903 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.79■□□□□ 0.44
HLA-DRAP01903 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DRAP01903 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HLA-DRAP01903 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DRAP01903 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HLA-DRAP01903 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DRAP01903 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.79■□□□□ 0.44
HLA-DRAP01903 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HLA-DRAP01903 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.79■□□□□ 0.44
HLA-DRAP01903 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.79■□□□□ 0.44
HLA-DRAP01903 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DRAP01903 AC006449.5-201ENST00000610658 2098 ntBASIC17.79■□□□□ 0.44
HLA-DRAP01903 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
HLA-DRAP01903 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
HLA-DRAP01903 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DRAP01903 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DRAP01903 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DRAP01903 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DRAP01903 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DRAP01903 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
HLA-DRAP01903 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DRAP01903 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRAP01903 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRAP01903 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.78■□□□□ 0.44
HLA-DRAP01903 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRAP01903 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRAP01903 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRAP01903 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRAP01903 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
HLA-DRAP01903 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRAP01903 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRAP01903 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRAP01903 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HLA-DRAP01903 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.78■□□□□ 0.44
HLA-DRAP01903 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.78■□□□□ 0.44
HLA-DRAP01903 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HLA-DRAP01903 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DRAP01903 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms