Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-AP01891 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
HLA-AP01891 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-AP01891 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.09□□□□□ -0.15
HLA-AP01891 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-AP01891 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-AP01891 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HLA-AP01891 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.08□□□□□ -0.15
HLA-AP01891 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
HLA-AP01891 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HLA-AP01891 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HLA-AP01891 AC006449.6-201ENST00000612330 2296 ntBASIC14.08□□□□□ -0.15
HLA-AP01891 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HLA-AP01891 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-AP01891 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
HLA-AP01891 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
HLA-AP01891 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-AP01891 PRAL-201ENST00000624952 3286 ntBASIC14.08□□□□□ -0.16
HLA-AP01891 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HLA-AP01891 GGT4P-201ENST00000623672 1708 ntBASIC14.08□□□□□ -0.16
HLA-AP01891 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-AP01891 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-AP01891 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-AP01891 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HLA-AP01891 STARP1-201ENST00000397973 869 ntBASIC14.08□□□□□ -0.16
HLA-AP01891 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.08□□□□□ -0.16
HLA-AP01891 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HLA-AP01891 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.08□□□□□ -0.16
HLA-AP01891 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.08□□□□□ -0.16
HLA-AP01891 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.08□□□□□ -0.16
HLA-AP01891 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-AP01891 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.08□□□□□ -0.16
HLA-AP01891 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.08□□□□□ -0.16
HLA-AP01891 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.08□□□□□ -0.16
HLA-AP01891 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.08□□□□□ -0.16
HLA-AP01891 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-AP01891 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HLA-AP01891 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-AP01891 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-AP01891 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.08□□□□□ -0.16
HLA-AP01891 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.08□□□□□ -0.16
HLA-AP01891 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.08□□□□□ -0.16
HLA-AP01891 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-AP01891 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-AP01891 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-AP01891 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-AP01891 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-AP01891 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-AP01891 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-AP01891 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-AP01891 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-AP01891 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-AP01891 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-AP01891 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.07□□□□□ -0.16
HLA-AP01891 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.07□□□□□ -0.16
HLA-AP01891 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.07□□□□□ -0.16
HLA-AP01891 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
HLA-AP01891 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-AP01891 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.07□□□□□ -0.16
HLA-AP01891 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-AP01891 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.07□□□□□ -0.16
HLA-AP01891 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-AP01891 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-AP01891 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-AP01891 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.07□□□□□ -0.16
HLA-AP01891 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-AP01891 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-AP01891 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-AP01891 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-AP01891 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-AP01891 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.07□□□□□ -0.16
HLA-AP01891 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.07□□□□□ -0.16
HLA-AP01891 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.07□□□□□ -0.16
HLA-AP01891 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.07□□□□□ -0.16
HLA-AP01891 AC112907.2-201ENST00000448639 330 ntBASIC14.07□□□□□ -0.16
HLA-AP01891 AC063952.2-201ENST00000498792 1227 ntBASIC14.07□□□□□ -0.16
HLA-AP01891 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.07□□□□□ -0.16
HLA-AP01891 AC022616.7-201ENST00000525383 220 ntBASIC14.07□□□□□ -0.16
HLA-AP01891 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.07□□□□□ -0.16
HLA-AP01891 AL049597.2-201ENST00000565575 961 ntBASIC14.07□□□□□ -0.16
HLA-AP01891 STK25P1-201ENST00000585406 838 ntBASIC14.07□□□□□ -0.16
HLA-AP01891 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.07□□□□□ -0.16
HLA-AP01891 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-AP01891 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-AP01891 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-AP01891 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
HLA-AP01891 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-AP01891 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-AP01891 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-AP01891 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-AP01891 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
HLA-AP01891 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-AP01891 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
HLA-AP01891 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.07□□□□□ -0.16
HLA-AP01891 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.07□□□□□ -0.16
HLA-AP01891 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HLA-AP01891 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.07□□□□□ -0.16
HLA-AP01891 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-AP01891 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-AP01891 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms