Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TNFRSF6BO95407 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.12□□□□□ -0.47
TNFRSF6BO95407 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TNFRSF6BO95407 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.12□□□□□ -0.47
TNFRSF6BO95407 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.12□□□□□ -0.47
TNFRSF6BO95407 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TNFRSF6BO95407 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TNFRSF6BO95407 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
TNFRSF6BO95407 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TNFRSF6BO95407 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TNFRSF6BO95407 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TNFRSF6BO95407 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TNFRSF6BO95407 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 OR2I1P-209ENST00000641730 5365 ntBASIC12.11□□□□□ -0.47
TNFRSF6BO95407 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TNFRSF6BO95407 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TNFRSF6BO95407 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TNFRSF6BO95407 AC097637.2-201ENST00000624096 1997 ntBASIC12.1□□□□□ -0.47
TNFRSF6BO95407 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TNFRSF6BO95407 HARS-203ENST00000431330 1774 ntTSL 2 BASIC12.1□□□□□ -0.47
TNFRSF6BO95407 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.1□□□□□ -0.47
TNFRSF6BO95407 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.1□□□□□ -0.47
TNFRSF6BO95407 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TNFRSF6BO95407 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TNFRSF6BO95407 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.1□□□□□ -0.47
TNFRSF6BO95407 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC12.1□□□□□ -0.47
TNFRSF6BO95407 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.1□□□□□ -0.47
TNFRSF6BO95407 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TNFRSF6BO95407 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TNFRSF6BO95407 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TNFRSF6BO95407 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TNFRSF6BO95407 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TNFRSF6BO95407 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TNFRSF6BO95407 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TNFRSF6BO95407 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.1□□□□□ -0.47
TNFRSF6BO95407 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TNFRSF6BO95407 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TNFRSF6BO95407 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.1□□□□□ -0.47
TNFRSF6BO95407 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.1□□□□□ -0.47
TNFRSF6BO95407 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TNFRSF6BO95407 AC003669.1-201ENST00000334569 611 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms