Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDH8O95206 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDH8O95206 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH8O95206 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH8O95206 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDH8O95206 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PCDH8O95206 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH8O95206 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH8O95206 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH8O95206 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDH8O95206 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH8O95206 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH8O95206 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
PCDH8O95206 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH8O95206 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH8O95206 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDH8O95206 AC107890.1-201ENST00000422478 521 ntBASIC16.55■□□□□ 0.24
PCDH8O95206 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDH8O95206 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDH8O95206 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDH8O95206 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH8O95206 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.55■□□□□ 0.24
PCDH8O95206 AC005498.2-205ENST00000593218 784 ntBASIC16.55■□□□□ 0.24
PCDH8O95206 AC092364.2-202ENST00000597012 1073 ntBASIC16.55■□□□□ 0.24
PCDH8O95206 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH8O95206 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH8O95206 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH8O95206 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH8O95206 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH8O95206 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH8O95206 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDH8O95206 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH8O95206 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH8O95206 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PCDH8O95206 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH8O95206 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PCDH8O95206 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDH8O95206 SNX33P1-201ENST00000592116 1762 ntBASIC16.54■□□□□ 0.24
PCDH8O95206 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH8O95206 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH8O95206 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PCDH8O95206 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PCDH8O95206 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCDH8O95206 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.54■□□□□ 0.24
PCDH8O95206 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDH8O95206 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH8O95206 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH8O95206 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH8O95206 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
PCDH8O95206 MIR943-201ENST00000401286 94 ntBASIC16.54■□□□□ 0.24
PCDH8O95206 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDH8O95206 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH8O95206 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDH8O95206 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.54■□□□□ 0.24
PCDH8O95206 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.54■□□□□ 0.24
PCDH8O95206 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH8O95206 AC093214.1-201ENST00000511688 1107 ntBASIC16.54■□□□□ 0.24
PCDH8O95206 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDH8O95206 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDH8O95206 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.54■□□□□ 0.24
PCDH8O95206 AC012313.1-201ENST00000593393 3059 ntBASIC16.54■□□□□ 0.24
PCDH8O95206 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH8O95206 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCDH8O95206 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH8O95206 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PCDH8O95206 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PCDH8O95206 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH8O95206 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH8O95206 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
PCDH8O95206 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH8O95206 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH8O95206 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH8O95206 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCDH8O95206 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH8O95206 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDH8O95206 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDH8O95206 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDH8O95206 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDH8O95206 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCDH8O95206 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH8O95206 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH8O95206 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PCDH8O95206 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
PCDH8O95206 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDH8O95206 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH8O95206 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH8O95206 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH8O95206 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH8O95206 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH8O95206 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDH8O95206 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH8O95206 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH8O95206 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH8O95206 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDH8O95206 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDH8O95206 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.53■□□□□ 0.24
PCDH8O95206 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDH8O95206 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDH8O95206 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDH8O95206 AC051619.7-201ENST00000568314 623 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms