Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH16O75309 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH16O75309 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH16O75309 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH16O75309 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH16O75309 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH16O75309 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH16O75309 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH16O75309 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH16O75309 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH16O75309 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH16O75309 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH16O75309 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CDH16O75309 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH16O75309 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH16O75309 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDH16O75309 PCGF3-213ENST00000620529 1899 ntBASIC16.82■□□□□ 0.28
CDH16O75309 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH16O75309 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH16O75309 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CDH16O75309 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDH16O75309 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH16O75309 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH16O75309 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH16O75309 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH16O75309 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH16O75309 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH16O75309 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH16O75309 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH16O75309 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDH16O75309 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH16O75309 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CDH16O75309 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH16O75309 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH16O75309 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH16O75309 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH16O75309 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.81■□□□□ 0.28
CDH16O75309 CHCHD2P8-201ENST00000429873 447 ntBASIC16.81■□□□□ 0.28
CDH16O75309 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH16O75309 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH16O75309 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH16O75309 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.81■□□□□ 0.28
CDH16O75309 MIR4492-201ENST00000581627 80 ntBASIC16.81■□□□□ 0.28
CDH16O75309 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH16O75309 AP000550.4-202ENST00000639755 178 ntBASIC16.81■□□□□ 0.28
CDH16O75309 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH16O75309 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH16O75309 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH16O75309 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH16O75309 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH16O75309 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH16O75309 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH16O75309 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH16O75309 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CDH16O75309 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH16O75309 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH16O75309 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH16O75309 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CDH16O75309 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH16O75309 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH16O75309 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH16O75309 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH16O75309 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH16O75309 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH16O75309 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH16O75309 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH16O75309 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CDH16O75309 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH16O75309 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH16O75309 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH16O75309 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH16O75309 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH16O75309 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.8■□□□□ 0.28
CDH16O75309 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CDH16O75309 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.8■□□□□ 0.28
CDH16O75309 AL353135.1-201ENST00000606729 504 ntBASIC16.8■□□□□ 0.28
CDH16O75309 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH16O75309 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CDH16O75309 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH16O75309 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.8■□□□□ 0.28
CDH16O75309 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH16O75309 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.8■□□□□ 0.28
CDH16O75309 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH16O75309 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH16O75309 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.8■□□□□ 0.28
CDH16O75309 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH16O75309 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CDH16O75309 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH16O75309 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH16O75309 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.8■□□□□ 0.28
CDH16O75309 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.8■□□□□ 0.28
CDH16O75309 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CDH16O75309 AC013268.4-201ENST00000637413 2228 ntBASIC16.8■□□□□ 0.28
CDH16O75309 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH16O75309 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH16O75309 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.79■□□□□ 0.28
CDH16O75309 GPAA1P2-202ENST00000606848 1787 ntBASIC16.79■□□□□ 0.28
CDH16O75309 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH16O75309 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.79■□□□□ 0.28
CDH16O75309 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms