Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNND1O60716 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CTNND1O60716 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNND1O60716 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNND1O60716 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNND1O60716 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNND1O60716 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNND1O60716 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNND1O60716 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTNND1O60716 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.27■□□□□ 0.68
CTNND1O60716 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTNND1O60716 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTNND1O60716 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTNND1O60716 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTNND1O60716 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.27■□□□□ 0.68
CTNND1O60716 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTNND1O60716 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTNND1O60716 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTNND1O60716 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.27■□□□□ 0.68
CTNND1O60716 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTNND1O60716 AP002490.2-201ENST00000524791 560 ntBASIC19.27■□□□□ 0.68
CTNND1O60716 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.27■□□□□ 0.68
CTNND1O60716 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.27■□□□□ 0.68
CTNND1O60716 AC024267.1-201ENST00000582320 895 ntBASIC19.27■□□□□ 0.68
CTNND1O60716 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.27■□□□□ 0.68
CTNND1O60716 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTNND1O60716 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
CTNND1O60716 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTNND1O60716 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.27■□□□□ 0.68
CTNND1O60716 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTNND1O60716 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTNND1O60716 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTNND1O60716 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
CTNND1O60716 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CTNND1O60716 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTNND1O60716 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.27■□□□□ 0.67
CTNND1O60716 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CTNND1O60716 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTNND1O60716 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CTNND1O60716 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CTNND1O60716 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CTNND1O60716 AL391256.1-201ENST00000443260 1855 ntBASIC19.26■□□□□ 0.67
CTNND1O60716 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTNND1O60716 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CTNND1O60716 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTNND1O60716 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CTNND1O60716 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTNND1O60716 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.26■□□□□ 0.67
CTNND1O60716 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTNND1O60716 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CTNND1O60716 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTNND1O60716 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.26■□□□□ 0.67
CTNND1O60716 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.26■□□□□ 0.67
CTNND1O60716 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CTNND1O60716 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.26■□□□□ 0.67
CTNND1O60716 AC020765.3-201ENST00000613051 740 ntBASIC19.26■□□□□ 0.67
CTNND1O60716 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTNND1O60716 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTNND1O60716 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTNND1O60716 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.26■□□□□ 0.67
CTNND1O60716 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.26■□□□□ 0.67
CTNND1O60716 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CTNND1O60716 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTNND1O60716 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CTNND1O60716 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTNND1O60716 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.25■□□□□ 0.67
CTNND1O60716 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC19.25■□□□□ 0.67
CTNND1O60716 AL512652.2-201ENST00000625156 1716 ntBASIC19.25■□□□□ 0.67
CTNND1O60716 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.25■□□□□ 0.67
CTNND1O60716 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTNND1O60716 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTNND1O60716 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTNND1O60716 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTNND1O60716 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTNND1O60716 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTNND1O60716 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CTNND1O60716 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTNND1O60716 KRT17P7-201ENST00000451704 1104 ntBASIC19.25■□□□□ 0.67
CTNND1O60716 HLA-J-202ENST00000469281 1241 ntBASIC19.25■□□□□ 0.67
CTNND1O60716 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.25■□□□□ 0.67
CTNND1O60716 AC140912.1-201ENST00000577171 1054 ntBASIC19.25■□□□□ 0.67
CTNND1O60716 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTNND1O60716 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CTNND1O60716 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTNND1O60716 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.25■□□□□ 0.67
CTNND1O60716 AL589702.1-201ENST00000641229 1509 ntBASIC19.25■□□□□ 0.67
CTNND1O60716 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTNND1O60716 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19.25■□□□□ 0.67
CTNND1O60716 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CTNND1O60716 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CTNND1O60716 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTNND1O60716 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTNND1O60716 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTNND1O60716 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CTNND1O60716 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.24■□□□□ 0.67
CTNND1O60716 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.24■□□□□ 0.67
CTNND1O60716 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CTNND1O60716 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTNND1O60716 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTNND1O60716 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms