Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
KLHL41O60662 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
KLHL41O60662 AL353593.2-201ENST00000602529 1483 ntBASIC16.54■□□□□ 0.24
KLHL41O60662 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
KLHL41O60662 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
KLHL41O60662 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.54■□□□□ 0.24
KLHL41O60662 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
KLHL41O60662 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
KLHL41O60662 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.54■□□□□ 0.24
KLHL41O60662 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.54■□□□□ 0.24
KLHL41O60662 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.54■□□□□ 0.24
KLHL41O60662 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
KLHL41O60662 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.54■□□□□ 0.24
KLHL41O60662 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.54■□□□□ 0.24
KLHL41O60662 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.54■□□□□ 0.24
KLHL41O60662 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.54■□□□□ 0.24
KLHL41O60662 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
KLHL41O60662 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
KLHL41O60662 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
KLHL41O60662 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.54■□□□□ 0.24
KLHL41O60662 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.54■□□□□ 0.24
KLHL41O60662 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.54■□□□□ 0.24
KLHL41O60662 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
KLHL41O60662 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
KLHL41O60662 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.54■□□□□ 0.24
KLHL41O60662 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.54■□□□□ 0.24
KLHL41O60662 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
KLHL41O60662 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.54■□□□□ 0.24
KLHL41O60662 FAM215A-202ENST00000632077 792 ntBASIC16.54■□□□□ 0.24
KLHL41O60662 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
KLHL41O60662 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
KLHL41O60662 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.54■□□□□ 0.24
KLHL41O60662 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
KLHL41O60662 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.54■□□□□ 0.24
KLHL41O60662 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
KLHL41O60662 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.54■□□□□ 0.24
KLHL41O60662 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
KLHL41O60662 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KLHL41O60662 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL41O60662 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL41O60662 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL41O60662 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.53■□□□□ 0.24
KLHL41O60662 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL41O60662 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL41O60662 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
KLHL41O60662 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
KLHL41O60662 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL41O60662 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL41O60662 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.53■□□□□ 0.24
KLHL41O60662 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL41O60662 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
KLHL41O60662 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL41O60662 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL41O60662 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL41O60662 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
KLHL41O60662 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL41O60662 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
KLHL41O60662 RPL13AP23-201ENST00000480739 586 ntBASIC16.53■□□□□ 0.24
KLHL41O60662 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.53■□□□□ 0.24
KLHL41O60662 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.53■□□□□ 0.24
KLHL41O60662 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.53■□□□□ 0.24
KLHL41O60662 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.53■□□□□ 0.24
KLHL41O60662 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL41O60662 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KLHL41O60662 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.53■□□□□ 0.24
KLHL41O60662 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.53■□□□□ 0.24
KLHL41O60662 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
KLHL41O60662 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms