Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 AC068137.2-201ENST00000605408 478 ntBASIC20.46■□□□□ 0.87
SMARCA5O60264 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC20.46■□□□□ 0.87
SMARCA5O60264 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCA5O60264 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
SMARCA5O60264 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCA5O60264 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SMARCA5O60264 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCA5O60264 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCA5O60264 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCA5O60264 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCA5O60264 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.46■□□□□ 0.87
SMARCA5O60264 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
SMARCA5O60264 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC20.45■□□□□ 0.86
SMARCA5O60264 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.45■□□□□ 0.86
SMARCA5O60264 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SMARCA5O60264 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC20.45■□□□□ 0.86
SMARCA5O60264 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC20.45■□□□□ 0.86
SMARCA5O60264 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC20.45■□□□□ 0.86
SMARCA5O60264 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.45■□□□□ 0.86
SMARCA5O60264 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.45■□□□□ 0.86
SMARCA5O60264 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.45■□□□□ 0.86
SMARCA5O60264 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
SMARCA5O60264 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCA5O60264 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCA5O60264 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCA5O60264 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.45■□□□□ 0.86
SMARCA5O60264 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCA5O60264 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.45■□□□□ 0.86
SMARCA5O60264 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCA5O60264 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCA5O60264 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCA5O60264 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.45■□□□□ 0.86
SMARCA5O60264 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCA5O60264 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.45■□□□□ 0.86
SMARCA5O60264 AC016027.1-202ENST00000607927 1699 ntBASIC20.45■□□□□ 0.86
SMARCA5O60264 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SMARCA5O60264 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCA5O60264 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC20.44■□□□□ 0.86
SMARCA5O60264 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SMARCA5O60264 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCA5O60264 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.44■□□□□ 0.86
SMARCA5O60264 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCA5O60264 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC20.44■□□□□ 0.86
SMARCA5O60264 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC20.44■□□□□ 0.86
SMARCA5O60264 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC20.44■□□□□ 0.86
SMARCA5O60264 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCA5O60264 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCA5O60264 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCA5O60264 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.44■□□□□ 0.86
SMARCA5O60264 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.44■□□□□ 0.86
SMARCA5O60264 PMS2P4-201ENST00000412466 1052 ntBASIC20.44■□□□□ 0.86
SMARCA5O60264 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.44■□□□□ 0.86
SMARCA5O60264 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.44■□□□□ 0.86
SMARCA5O60264 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.44■□□□□ 0.86
SMARCA5O60264 AC099522.2-201ENST00000607001 744 ntBASIC20.44■□□□□ 0.86
SMARCA5O60264 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC20.44■□□□□ 0.86
SMARCA5O60264 GCK-209ENST00000616242 2260 ntTSL 5 BASIC20.44■□□□□ 0.86
SMARCA5O60264 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCA5O60264 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SMARCA5O60264 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCA5O60264 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.44■□□□□ 0.86
SMARCA5O60264 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCA5O60264 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC20.44■□□□□ 0.86
SMARCA5O60264 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.44■□□□□ 0.86
SMARCA5O60264 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SMARCA5O60264 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCA5O60264 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.44■□□□□ 0.86
SMARCA5O60264 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCA5O60264 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCA5O60264 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCA5O60264 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCA5O60264 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.43■□□□□ 0.86
SMARCA5O60264 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCA5O60264 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCA5O60264 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCA5O60264 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCA5O60264 REXO1L8P-201ENST00000604378 1897 ntBASIC20.43■□□□□ 0.86
SMARCA5O60264 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCA5O60264 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.43■□□□□ 0.86
SMARCA5O60264 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCA5O60264 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCA5O60264 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCA5O60264 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCA5O60264 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.43■□□□□ 0.86
SMARCA5O60264 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCA5O60264 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.43■□□□□ 0.86
SMARCA5O60264 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.43■□□□□ 0.86
SMARCA5O60264 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCA5O60264 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.43■□□□□ 0.86
SMARCA5O60264 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCA5O60264 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.43■□□□□ 0.86
SMARCA5O60264 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.43■□□□□ 0.86
SMARCA5O60264 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SMARCA5O60264 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.43■□□□□ 0.86
SMARCA5O60264 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SMARCA5O60264 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCA5O60264 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCA5O60264 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCA5O60264 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCA5O60264 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms