Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL13O43927 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL13O43927 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.85□□□□□ -0.03
CXCL13O43927 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL13O43927 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL13O43927 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL13O43927 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL13O43927 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL13O43927 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL13O43927 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL13O43927 AL592309.1-201ENST00000443127 649 ntBASIC14.85□□□□□ -0.03
CXCL13O43927 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CXCL13O43927 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CXCL13O43927 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.85□□□□□ -0.03
CXCL13O43927 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.85□□□□□ -0.03
CXCL13O43927 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
CXCL13O43927 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.85□□□□□ -0.03
CXCL13O43927 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
CXCL13O43927 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.85□□□□□ -0.03
CXCL13O43927 AC004835.2-201ENST00000603762 682 ntBASIC14.85□□□□□ -0.03
CXCL13O43927 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CXCL13O43927 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL13O43927 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL13O43927 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL13O43927 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.85□□□□□ -0.03
CXCL13O43927 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL13O43927 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL13O43927 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL13O43927 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.85□□□□□ -0.03
CXCL13O43927 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CXCL13O43927 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL13O43927 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL13O43927 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCL13O43927 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL13O43927 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCL13O43927 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL13O43927 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL13O43927 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL13O43927 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.84□□□□□ -0.03
CXCL13O43927 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL13O43927 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL13O43927 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL13O43927 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL13O43927 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.84□□□□□ -0.03
CXCL13O43927 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL13O43927 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL13O43927 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL13O43927 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CXCL13O43927 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL13O43927 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCL13O43927 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL13O43927 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL13O43927 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CXCL13O43927 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCL13O43927 AC005237.2-201ENST00000434368 219 ntBASIC14.84□□□□□ -0.03
CXCL13O43927 SPCS2P4-201ENST00000436160 681 ntBASIC14.84□□□□□ -0.03
CXCL13O43927 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.84□□□□□ -0.03
CXCL13O43927 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCL13O43927 IGHV3-62-201ENST00000520057 340 ntBASIC14.84□□□□□ -0.03
CXCL13O43927 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CXCL13O43927 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CXCL13O43927 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CXCL13O43927 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.84□□□□□ -0.03
CXCL13O43927 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.84□□□□□ -0.03
CXCL13O43927 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCL13O43927 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.84□□□□□ -0.03
CXCL13O43927 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCL13O43927 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.84□□□□□ -0.03
CXCL13O43927 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL13O43927 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CXCL13O43927 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CXCL13O43927 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL13O43927 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCL13O43927 AC092171.3-201ENST00000610122 2651 ntBASIC14.84□□□□□ -0.03
CXCL13O43927 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.84□□□□□ -0.03
CXCL13O43927 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
CXCL13O43927 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCL13O43927 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.84□□□□□ -0.03
CXCL13O43927 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL13O43927 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL13O43927 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CXCL13O43927 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CXCL13O43927 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
CXCL13O43927 NKILA-202ENST00000614771 2598 ntBASIC14.83□□□□□ -0.03
CXCL13O43927 GGT4P-201ENST00000623672 1708 ntBASIC14.83□□□□□ -0.03
CXCL13O43927 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
CXCL13O43927 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.83□□□□□ -0.03
CXCL13O43927 GPAA1P2-202ENST00000606848 1787 ntBASIC14.83□□□□□ -0.03
CXCL13O43927 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CXCL13O43927 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL13O43927 AGGF1P2-201ENST00000426656 2106 ntBASIC14.83□□□□□ -0.04
CXCL13O43927 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL13O43927 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL13O43927 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL13O43927 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.83□□□□□ -0.04
CXCL13O43927 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL13O43927 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL13O43927 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL13O43927 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL13O43927 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms