Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SNAI2O43623 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SNAI2O43623 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNAI2O43623 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNAI2O43623 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.49□□□□□ -0.41
SNAI2O43623 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SNAI2O43623 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNAI2O43623 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SNAI2O43623 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
SNAI2O43623 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SNAI2O43623 AC003669.1-201ENST00000334569 611 ntBASIC12.49□□□□□ -0.41
SNAI2O43623 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNAI2O43623 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.49□□□□□ -0.41
SNAI2O43623 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
SNAI2O43623 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC12.49□□□□□ -0.41
SNAI2O43623 LIN28AP1-201ENST00000429574 405 ntBASIC12.49□□□□□ -0.41
SNAI2O43623 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SNAI2O43623 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC12.49□□□□□ -0.41
SNAI2O43623 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNAI2O43623 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC12.49□□□□□ -0.41
SNAI2O43623 AL353801.3-201ENST00000609898 542 ntBASIC12.49□□□□□ -0.41
SNAI2O43623 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SNAI2O43623 AC011558.1-201ENST00000623459 338 ntBASIC12.49□□□□□ -0.41
SNAI2O43623 WDR6-223ENST00000627177 207 ntTSL 2 BASIC12.49□□□□□ -0.41
SNAI2O43623 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNAI2O43623 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNAI2O43623 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNAI2O43623 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNAI2O43623 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNAI2O43623 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNAI2O43623 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNAI2O43623 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNAI2O43623 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SNAI2O43623 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNAI2O43623 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SNAI2O43623 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12.48□□□□□ -0.41
SNAI2O43623 AMT-206ENST00000458307 1860 ntTSL 2 BASIC12.48□□□□□ -0.41
SNAI2O43623 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNAI2O43623 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNAI2O43623 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC12.48□□□□□ -0.41
SNAI2O43623 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNAI2O43623 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
SNAI2O43623 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNAI2O43623 AC006538.1-201ENST00000567905 1585 ntBASIC12.48□□□□□ -0.41
SNAI2O43623 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.48□□□□□ -0.41
SNAI2O43623 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
SNAI2O43623 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SNAI2O43623 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNAI2O43623 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
SNAI2O43623 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNAI2O43623 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNAI2O43623 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNAI2O43623 AC126177.1-201ENST00000547829 2218 ntBASIC12.48□□□□□ -0.41
SNAI2O43623 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC12.48□□□□□ -0.41
SNAI2O43623 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNAI2O43623 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
SNAI2O43623 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNAI2O43623 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNAI2O43623 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNAI2O43623 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
SNAI2O43623 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNAI2O43623 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SNAI2O43623 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNAI2O43623 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC12.48□□□□□ -0.41
SNAI2O43623 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNAI2O43623 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC12.48□□□□□ -0.41
SNAI2O43623 ATP5G1P1-201ENST00000448724 379 ntBASIC12.48□□□□□ -0.41
SNAI2O43623 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC12.48□□□□□ -0.41
SNAI2O43623 GUSBP12-201ENST00000513727 720 ntBASIC12.48□□□□□ -0.41
SNAI2O43623 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
SNAI2O43623 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC12.48□□□□□ -0.41
SNAI2O43623 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC12.48□□□□□ -0.41
SNAI2O43623 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC12.48□□□□□ -0.41
SNAI2O43623 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.48□□□□□ -0.41
SNAI2O43623 VPS72-207ENST00000640458 689 ntTSL 5 BASIC12.48□□□□□ -0.41
SNAI2O43623 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNAI2O43623 AL365203.3-201ENST00000609742 2057 ntBASIC12.48□□□□□ -0.41
SNAI2O43623 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SNAI2O43623 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.48□□□□□ -0.41
SNAI2O43623 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNAI2O43623 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SNAI2O43623 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.48□□□□□ -0.41
SNAI2O43623 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.48□□□□□ -0.41
SNAI2O43623 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SNAI2O43623 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.48□□□□□ -0.41
SNAI2O43623 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.48□□□□□ -0.41
SNAI2O43623 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNAI2O43623 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SNAI2O43623 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNAI2O43623 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SNAI2O43623 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SNAI2O43623 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.48□□□□□ -0.41
SNAI2O43623 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC12.47□□□□□ -0.41
SNAI2O43623 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
SNAI2O43623 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC12.47□□□□□ -0.41
SNAI2O43623 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC12.47□□□□□ -0.41
SNAI2O43623 LGALS8-AS1-201ENST00000487567 1457 ntBASIC12.47□□□□□ -0.41
SNAI2O43623 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SNAI2O43623 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC12.47□□□□□ -0.41
SNAI2O43623 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms