Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.75■□□□□ 0.75
FOXN1O15353 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN1O15353 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN1O15353 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN1O15353 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN1O15353 AC087499.6-201ENST00000411576 835 ntBASIC19.75■□□□□ 0.75
FOXN1O15353 TMEM14DP-201ENST00000422205 345 ntBASIC19.75■□□□□ 0.75
FOXN1O15353 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.75■□□□□ 0.75
FOXN1O15353 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.75■□□□□ 0.75
FOXN1O15353 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC19.75■□□□□ 0.75
FOXN1O15353 MFF-223ENST00000524634 647 ntTSL 2 BASIC19.75■□□□□ 0.75
FOXN1O15353 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.75■□□□□ 0.75
FOXN1O15353 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.75■□□□□ 0.75
FOXN1O15353 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC19.75■□□□□ 0.75
FOXN1O15353 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN1O15353 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.75■□□□□ 0.75
FOXN1O15353 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN1O15353 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.75■□□□□ 0.75
FOXN1O15353 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
FOXN1O15353 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN1O15353 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN1O15353 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN1O15353 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
FOXN1O15353 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN1O15353 AC060834.1-201ENST00000443027 2032 ntBASIC19.75■□□□□ 0.75
FOXN1O15353 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN1O15353 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN1O15353 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN1O15353 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN1O15353 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
FOXN1O15353 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN1O15353 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN1O15353 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN1O15353 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN1O15353 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
FOXN1O15353 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN1O15353 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN1O15353 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.74■□□□□ 0.75
FOXN1O15353 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC19.74■□□□□ 0.75
FOXN1O15353 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.74■□□□□ 0.75
FOXN1O15353 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
FOXN1O15353 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC19.74■□□□□ 0.75
FOXN1O15353 HIST1H2BPS3-201ENST00000419683 341 ntBASIC19.74■□□□□ 0.75
FOXN1O15353 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.74■□□□□ 0.75
FOXN1O15353 AC099548.2-209ENST00000480264 625 ntBASIC19.74■□□□□ 0.75
FOXN1O15353 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN1O15353 ORC6-206ENST00000568364 888 ntTSL 5 BASIC19.74■□□□□ 0.75
FOXN1O15353 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
FOXN1O15353 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC19.74■□□□□ 0.75
FOXN1O15353 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN1O15353 AL139099.5-201ENST00000635274 300 ntBASIC19.74■□□□□ 0.75
FOXN1O15353 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
FOXN1O15353 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN1O15353 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN1O15353 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
FOXN1O15353 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.74■□□□□ 0.75
FOXN1O15353 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN1O15353 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN1O15353 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.74■□□□□ 0.75
FOXN1O15353 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.74■□□□□ 0.75
FOXN1O15353 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
FOXN1O15353 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN1O15353 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN1O15353 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN1O15353 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN1O15353 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN1O15353 AL391825.1-201ENST00000457671 1364 ntBASIC19.73■□□□□ 0.75
FOXN1O15353 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN1O15353 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
FOXN1O15353 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN1O15353 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN1O15353 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN1O15353 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN1O15353 MIR346-201ENST00000362234 95 ntBASIC19.73■□□□□ 0.75
FOXN1O15353 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC19.73■□□□□ 0.75
FOXN1O15353 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC19.73■□□□□ 0.75
FOXN1O15353 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.73■□□□□ 0.75
FOXN1O15353 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.73■□□□□ 0.75
FOXN1O15353 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN1O15353 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC19.73■□□□□ 0.75
FOXN1O15353 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.73■□□□□ 0.75
FOXN1O15353 AC008735.3-201ENST00000596646 500 ntBASIC19.73■□□□□ 0.75
FOXN1O15353 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN1O15353 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
FOXN1O15353 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
FOXN1O15353 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN1O15353 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.73■□□□□ 0.75
FOXN1O15353 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN1O15353 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN1O15353 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN1O15353 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN1O15353 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
FOXN1O15353 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN1O15353 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN1O15353 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN1O15353 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN1O15353 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.73■□□□□ 0.75
FOXN1O15353 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.73■□□□□ 0.75
FOXN1O15353 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN1O15353 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms