Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A1O14983 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A1O14983 AC093724.1-201ENST00000448659 1027 ntBASIC18.91■□□□□ 0.62
ATP2A1O14983 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.91■□□□□ 0.62
ATP2A1O14983 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.91■□□□□ 0.62
ATP2A1O14983 SERBP1P5-201ENST00000510079 1181 ntBASIC18.91■□□□□ 0.62
ATP2A1O14983 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.91■□□□□ 0.62
ATP2A1O14983 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.91■□□□□ 0.62
ATP2A1O14983 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.91■□□□□ 0.62
ATP2A1O14983 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.91■□□□□ 0.62
ATP2A1O14983 AL133215.2-201ENST00000609242 977 ntBASIC18.91■□□□□ 0.62
ATP2A1O14983 AC020765.3-201ENST00000613051 740 ntBASIC18.91■□□□□ 0.62
ATP2A1O14983 AC009118.2-201ENST00000613275 655 ntBASIC18.91■□□□□ 0.62
ATP2A1O14983 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.91■□□□□ 0.62
ATP2A1O14983 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A1O14983 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A1O14983 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A1O14983 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.91■□□□□ 0.62
ATP2A1O14983 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
ATP2A1O14983 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.91■□□□□ 0.62
ATP2A1O14983 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A1O14983 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A1O14983 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ATP2A1O14983 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A1O14983 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.91■□□□□ 0.62
ATP2A1O14983 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A1O14983 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A1O14983 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.9■□□□□ 0.62
ATP2A1O14983 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A1O14983 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
ATP2A1O14983 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.9■□□□□ 0.62
ATP2A1O14983 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A1O14983 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A1O14983 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A1O14983 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A1O14983 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A1O14983 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
ATP2A1O14983 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ATP2A1O14983 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A1O14983 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.9■□□□□ 0.62
ATP2A1O14983 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A1O14983 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.9■□□□□ 0.62
ATP2A1O14983 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
ATP2A1O14983 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.9■□□□□ 0.62
ATP2A1O14983 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A1O14983 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
ATP2A1O14983 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.9■□□□□ 0.62
ATP2A1O14983 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.9■□□□□ 0.62
ATP2A1O14983 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A1O14983 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
ATP2A1O14983 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.9■□□□□ 0.62
ATP2A1O14983 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A1O14983 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
ATP2A1O14983 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A1O14983 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.9■□□□□ 0.62
ATP2A1O14983 TEX28P1-201ENST00000613479 1221 ntBASIC18.9■□□□□ 0.62
ATP2A1O14983 TEX28P2-201ENST00000617764 1221 ntBASIC18.9■□□□□ 0.62
ATP2A1O14983 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.9■□□□□ 0.62
ATP2A1O14983 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.9■□□□□ 0.62
ATP2A1O14983 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
ATP2A1O14983 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.9■□□□□ 0.62
ATP2A1O14983 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
ATP2A1O14983 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A1O14983 AC087499.5-201ENST00000452760 1342 ntBASIC18.9■□□□□ 0.62
ATP2A1O14983 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A1O14983 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A1O14983 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ATP2A1O14983 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
ATP2A1O14983 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.9■□□□□ 0.62
ATP2A1O14983 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A1O14983 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A1O14983 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A1O14983 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A1O14983 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A1O14983 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.62
ATP2A1O14983 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
ATP2A1O14983 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
ATP2A1O14983 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A1O14983 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.89■□□□□ 0.61
ATP2A1O14983 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A1O14983 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.89■□□□□ 0.61
ATP2A1O14983 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A1O14983 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A1O14983 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A1O14983 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A1O14983 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A1O14983 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A1O14983 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A1O14983 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.89■□□□□ 0.61
ATP2A1O14983 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.89■□□□□ 0.61
ATP2A1O14983 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.89■□□□□ 0.61
ATP2A1O14983 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A1O14983 AC105021.1-202ENST00000570572 669 ntBASIC18.89■□□□□ 0.61
ATP2A1O14983 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.89■□□□□ 0.61
ATP2A1O14983 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.89■□□□□ 0.61
ATP2A1O14983 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
ATP2A1O14983 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
ATP2A1O14983 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A1O14983 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
ATP2A1O14983 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms