Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CHD1O14646 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
CHD1O14646 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC26.24■■□□□ 1.79
CHD1O14646 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC26.23■■□□□ 1.79
CHD1O14646 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHD1O14646 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC26.23■■□□□ 1.79
CHD1O14646 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHD1O14646 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHD1O14646 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CHD1O14646 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHD1O14646 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC26.23■■□□□ 1.79
CHD1O14646 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHD1O14646 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CHD1O14646 KRTAP10-13P-201ENST00000412914 571 ntBASIC26.23■■□□□ 1.79
CHD1O14646 FNTAP2-201ENST00000430308 634 ntBASIC26.23■■□□□ 1.79
CHD1O14646 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC26.23■■□□□ 1.79
CHD1O14646 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHD1O14646 AP001063.1-201ENST00000568332 529 ntBASIC26.23■■□□□ 1.79
CHD1O14646 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC26.23■■□□□ 1.79
CHD1O14646 EEF1DP1-201ENST00000585891 896 ntBASIC26.23■■□□□ 1.79
CHD1O14646 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
CHD1O14646 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHD1O14646 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC26.23■■□□□ 1.79
CHD1O14646 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHD1O14646 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHD1O14646 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CHD1O14646 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
CHD1O14646 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHD1O14646 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CHD1O14646 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHD1O14646 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CHD1O14646 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHD1O14646 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC26.23■■□□□ 1.79
CHD1O14646 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC26.22■■□□□ 1.79
CHD1O14646 SDCCAG3P2-201ENST00000326105 1023 ntBASIC26.22■■□□□ 1.79
CHD1O14646 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
CHD1O14646 TOMM22P5-201ENST00000416399 439 ntBASIC26.22■■□□□ 1.79
CHD1O14646 FTLP1-201ENST00000449155 526 ntBASIC26.22■■□□□ 1.79
CHD1O14646 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHD1O14646 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC26.22■■□□□ 1.79
CHD1O14646 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC26.22■■□□□ 1.79
CHD1O14646 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC26.22■■□□□ 1.79
CHD1O14646 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC26.22■■□□□ 1.79
CHD1O14646 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC26.22■■□□□ 1.79
CHD1O14646 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
CHD1O14646 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
CHD1O14646 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CHD1O14646 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC26.22■■□□□ 1.79
CHD1O14646 HSPB1P2-201ENST00000448722 546 ntBASIC26.22■■□□□ 1.79
CHD1O14646 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC26.22■■□□□ 1.79
CHD1O14646 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
CHD1O14646 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC26.22■■□□□ 1.79
CHD1O14646 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHD1O14646 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHD1O14646 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
CHD1O14646 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CHD1O14646 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CHD1O14646 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CHD1O14646 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CHD1O14646 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC26.21■■□□□ 1.79
CHD1O14646 C2orf27AP3-201ENST00000434123 579 ntBASIC26.21■■□□□ 1.79
CHD1O14646 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CHD1O14646 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC26.21■■□□□ 1.79
CHD1O14646 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CHD1O14646 AC245884.6-201ENST00000515672 1067 ntBASIC26.21■■□□□ 1.79
CHD1O14646 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CHD1O14646 FGFR3P5-201ENST00000564496 886 ntBASIC26.21■■□□□ 1.79
CHD1O14646 AL354718.3-201ENST00000616414 581 ntBASIC26.21■■□□□ 1.79
CHD1O14646 CR382287.1-201ENST00000623954 586 ntBASIC26.21■■□□□ 1.79
CHD1O14646 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC26.21■■□□□ 1.79
CHD1O14646 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
CHD1O14646 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CHD1O14646 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CHD1O14646 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CHD1O14646 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC26.2■■□□□ 1.79
CHD1O14646 AC008267.1-201ENST00000474858 1069 ntBASIC26.2■■□□□ 1.79
CHD1O14646 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC26.2■■□□□ 1.79
CHD1O14646 CFL1-214ENST00000534769 758 ntTSL 2 BASIC26.2■■□□□ 1.79
CHD1O14646 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC26.2■■□□□ 1.79
CHD1O14646 MIR4321-201ENST00000592276 80 ntBASIC26.2■■□□□ 1.79
CHD1O14646 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC26.2■■□□□ 1.79
CHD1O14646 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
CHD1O14646 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC26.2■■□□□ 1.78
CHD1O14646 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CHD1O14646 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CHD1O14646 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC26.2■■□□□ 1.78
CHD1O14646 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CHD1O14646 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC26.2■■□□□ 1.78
CHD1O14646 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
CHD1O14646 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHD1O14646 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CHD1O14646 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC26.19■■□□□ 1.78
CHD1O14646 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC26.19■■□□□ 1.78
CHD1O14646 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC26.19■■□□□ 1.78
CHD1O14646 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC26.19■■□□□ 1.78
CHD1O14646 RN7SL574P-201ENST00000581512 297 ntBASIC26.19■■□□□ 1.78
CHD1O14646 KLK3-207ENST00000595952 969 ntTSL 3 BASIC26.19■■□□□ 1.78
CHD1O14646 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHD1O14646 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHD1O14646 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms