Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP3B1O00203 AC012640.2-201ENST00000561606 901 ntBASIC16.79■□□□□ 0.28
AP3B1O00203 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.79■□□□□ 0.28
AP3B1O00203 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.79■□□□□ 0.28
AP3B1O00203 RN7SL510P-201ENST00000581311 263 ntBASIC16.79■□□□□ 0.28
AP3B1O00203 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
AP3B1O00203 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.79■□□□□ 0.28
AP3B1O00203 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP3B1O00203 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
AP3B1O00203 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3B1O00203 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.79■□□□□ 0.28
AP3B1O00203 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP3B1O00203 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3B1O00203 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
AP3B1O00203 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3B1O00203 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.79■□□□□ 0.28
AP3B1O00203 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.79■□□□□ 0.28
AP3B1O00203 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3B1O00203 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3B1O00203 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3B1O00203 AC006449.6-201ENST00000612330 2296 ntBASIC16.79■□□□□ 0.28
AP3B1O00203 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3B1O00203 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3B1O00203 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3B1O00203 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP3B1O00203 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP3B1O00203 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3B1O00203 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3B1O00203 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.78■□□□□ 0.28
AP3B1O00203 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
AP3B1O00203 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3B1O00203 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.78■□□□□ 0.28
AP3B1O00203 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
AP3B1O00203 AL450487.1-201ENST00000426799 995 ntBASIC16.78■□□□□ 0.28
AP3B1O00203 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.78■□□□□ 0.28
AP3B1O00203 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.78■□□□□ 0.28
AP3B1O00203 AL031432.2-201ENST00000566714 459 ntBASIC16.78■□□□□ 0.28
AP3B1O00203 AL928711.1-201ENST00000570165 459 ntBASIC16.78■□□□□ 0.28
AP3B1O00203 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.78■□□□□ 0.28
AP3B1O00203 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP3B1O00203 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.78■□□□□ 0.28
AP3B1O00203 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
AP3B1O00203 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
AP3B1O00203 AC018695.7-201ENST00000624587 2492 ntBASIC16.78■□□□□ 0.28
AP3B1O00203 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.78■□□□□ 0.28
AP3B1O00203 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
AP3B1O00203 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3B1O00203 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3B1O00203 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3B1O00203 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3B1O00203 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3B1O00203 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP3B1O00203 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3B1O00203 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3B1O00203 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.78■□□□□ 0.28
AP3B1O00203 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3B1O00203 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP3B1O00203 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.78■□□□□ 0.28
AP3B1O00203 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3B1O00203 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.77■□□□□ 0.28
AP3B1O00203 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
AP3B1O00203 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3B1O00203 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3B1O00203 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3B1O00203 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3B1O00203 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3B1O00203 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.77■□□□□ 0.28
AP3B1O00203 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.77■□□□□ 0.28
AP3B1O00203 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3B1O00203 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.77■□□□□ 0.28
AP3B1O00203 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3B1O00203 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
AP3B1O00203 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP3B1O00203 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3B1O00203 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3B1O00203 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3B1O00203 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3B1O00203 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3B1O00203 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.77■□□□□ 0.28
AP3B1O00203 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3B1O00203 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.77■□□□□ 0.28
AP3B1O00203 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.77■□□□□ 0.28
AP3B1O00203 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3B1O00203 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.77■□□□□ 0.28
AP3B1O00203 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.77■□□□□ 0.28
AP3B1O00203 AL160237.2-201ENST00000556165 472 ntBASIC16.77■□□□□ 0.28
AP3B1O00203 OR7E47P-204ENST00000575924 449 ntBASIC16.77■□□□□ 0.28
AP3B1O00203 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
AP3B1O00203 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.77■□□□□ 0.28
AP3B1O00203 AC117500.6-201ENST00000624871 588 ntBASIC16.77■□□□□ 0.28
AP3B1O00203 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3B1O00203 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP3B1O00203 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP3B1O00203 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
AP3B1O00203 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.77■□□□□ 0.27
AP3B1O00203 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
AP3B1O00203 AL662844.4-201ENST00000606367 2838 ntBASIC16.77■□□□□ 0.27
AP3B1O00203 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
AP3B1O00203 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.77■□□□□ 0.27
AP3B1O00203 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms