Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 KRT8P49-201ENST00000604166 1432 ntBASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 AKAP8P1-201ENST00000434743 1349 ntBASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPIPA2E9PIF3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 AC022211.2-201ENST00000585075 2527 ntBASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 AC105020.1-201ENST00000435356 2205 ntBASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 KRT18P32-201ENST00000424695 1287 ntBASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 FAM86GP-201ENST00000448322 971 ntBASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 AC011467.4-201ENST00000594891 528 ntBASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 LINC02084-201ENST00000606069 1096 ntBASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 AC009093.7-201ENST00000623853 1223 ntBASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 AP001350.2-201ENST00000625104 1094 ntBASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 PRORSD1P-202ENST00000563365 2154 ntBASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA2E9PIF3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 AC087641.1-201ENST00000557561 1021 ntBASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 AC091167.2-201ENST00000579581 588 ntBASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 SLC22A20-204ENST00000530038 1673 ntBASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.11■□□□□ 0.01
NPIPA2E9PIF3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms