Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 TREML5P-201ENST00000421694 576 ntBASIC16.57■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 AL353705.2-201ENST00000428243 662 ntBASIC16.57■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.57■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.57■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.57■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.57■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.57■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.57■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.57■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 MIR3197-201ENST00000582241 73 ntBASIC16.57■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.57■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.57■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.57■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.57■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 FOXO1B-201ENST00000504678 1527 ntBASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 FO538757.1-201ENST00000623083 1397 ntBASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 RNA5SP410-201ENST00000516285 106 ntBASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 AL390955.2-201ENST00000603032 514 ntBASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 AL603756.1-201ENST00000606511 2163 ntBASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 AL031731.1-201ENST00000642131 2094 ntBASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 INGX-202ENST00000489074 768 ntBASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 AC007967.4-201ENST00000614700 386 ntBASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.55■□□□□ 0.24
C1QTNF3-AMACRE9PGA6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms