Protein–RNA interactions for Protein: C9JPN9

USP17L12, Ubiquitin carboxyl-terminal hydrolase 17-like protein 12, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L12C9JPN9 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.54■□□□□ 0.72
USP17L12C9JPN9 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
USP17L12C9JPN9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP17L12C9JPN9 PCGF3-213ENST00000620529 1899 ntBASIC19.54■□□□□ 0.72
USP17L12C9JPN9 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.54■□□□□ 0.72
USP17L12C9JPN9 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.54■□□□□ 0.72
USP17L12C9JPN9 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.54■□□□□ 0.72
USP17L12C9JPN9 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 AC018529.1-201ENST00000613063 361 ntBASIC19.53■□□□□ 0.72
USP17L12C9JPN9 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
USP17L12C9JPN9 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
USP17L12C9JPN9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.52■□□□□ 0.72
USP17L12C9JPN9 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.52■□□□□ 0.72
USP17L12C9JPN9 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP17L12C9JPN9 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.52■□□□□ 0.72
USP17L12C9JPN9 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.52■□□□□ 0.72
USP17L12C9JPN9 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
USP17L12C9JPN9 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP17L12C9JPN9 FAM220BP-201ENST00000377689 816 ntBASIC19.52■□□□□ 0.72
USP17L12C9JPN9 HLA-H-201ENST00000383620 1096 ntBASIC19.52■□□□□ 0.72
USP17L12C9JPN9 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.52■□□□□ 0.72
USP17L12C9JPN9 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
USP17L12C9JPN9 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.52■□□□□ 0.72
USP17L12C9JPN9 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.52■□□□□ 0.72
USP17L12C9JPN9 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.52■□□□□ 0.72
USP17L12C9JPN9 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.52■□□□□ 0.72
USP17L12C9JPN9 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.52■□□□□ 0.72
USP17L12C9JPN9 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.52■□□□□ 0.72
USP17L12C9JPN9 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
USP17L12C9JPN9 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.52■□□□□ 0.72
USP17L12C9JPN9 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.52■□□□□ 0.72
USP17L12C9JPN9 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.52■□□□□ 0.72
USP17L12C9JPN9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP17L12C9JPN9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP17L12C9JPN9 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP17L12C9JPN9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP17L12C9JPN9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP17L12C9JPN9 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.51■□□□□ 0.71
USP17L12C9JPN9 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
USP17L12C9JPN9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
USP17L12C9JPN9 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
USP17L12C9JPN9 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.51■□□□□ 0.71
USP17L12C9JPN9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.51■□□□□ 0.71
USP17L12C9JPN9 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.51■□□□□ 0.71
USP17L12C9JPN9 AC107890.1-201ENST00000422478 521 ntBASIC19.51■□□□□ 0.71
USP17L12C9JPN9 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.51■□□□□ 0.71
USP17L12C9JPN9 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP17L12C9JPN9 AC125807.1-201ENST00000483097 614 ntBASIC19.51■□□□□ 0.71
USP17L12C9JPN9 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.51■□□□□ 0.71
USP17L12C9JPN9 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.51■□□□□ 0.71
USP17L12C9JPN9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.51■□□□□ 0.71
USP17L12C9JPN9 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.51■□□□□ 0.71
USP17L12C9JPN9 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
USP17L12C9JPN9 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP17L12C9JPN9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP17L12C9JPN9 PCDHA12-202ENST00000613593 2588 ntBASIC19.51■□□□□ 0.71
USP17L12C9JPN9 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
USP17L12C9JPN9 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.51■□□□□ 0.71
USP17L12C9JPN9 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.51■□□□□ 0.71
USP17L12C9JPN9 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.51■□□□□ 0.71
USP17L12C9JPN9 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP17L12C9JPN9 LTB4R2-202ENST00000528054 3092 ntBASIC19.5■□□□□ 0.71
USP17L12C9JPN9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.5■□□□□ 0.71
USP17L12C9JPN9 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
USP17L12C9JPN9 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
USP17L12C9JPN9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.5■□□□□ 0.71
USP17L12C9JPN9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP17L12C9JPN9 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP17L12C9JPN9 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
USP17L12C9JPN9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP17L12C9JPN9 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP17L12C9JPN9 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.5■□□□□ 0.71
USP17L12C9JPN9 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms