Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 HLA-H-201ENST00000383620 1096 ntBASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TBC1D3FA6NER0 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 AC060834.1-201ENST00000443027 2032 ntBASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 AC020916.1-201ENST00000587762 1774 ntBASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 FOXO1B-201ENST00000504678 1527 ntBASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 AL645728.1-201ENST00000366221 2101 ntBASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 AC236430.1-201ENST00000402231 743 ntBASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 AC092580.3-201ENST00000430932 139 ntBASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 AC241585.1-201ENST00000433527 519 ntBASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 UGT1A2P-201ENST00000454886 866 ntBASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 AC073592.8-201ENST00000624126 511 ntBASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TBC1D3FA6NER0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.46■□□□□ 0.23
TBC1D3FA6NER0 AC098859.1-201ENST00000502915 1238 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms