Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC162PA2VCL2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 RNU1-129P-201ENST00000384064 167 ntBASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 AC018845.2-201ENST00000568326 409 ntBASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 U1.21-201ENST00000580816 167 ntBASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 AC064836.3-201ENST00000607928 673 ntBASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 AC120114.3-201ENST00000611923 658 ntBASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC162PA2VCL2 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 NFIC-211ENST00000641145 8399 ntBASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC162PA2VCL2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CCDC162PA2VCL2 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC162PA2VCL2 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC162PA2VCL2 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC162PA2VCL2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC162PA2VCL2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC162PA2VCL2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms