Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TCRBV7S3A2A0A539 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TCRBV7S3A2A0A539 FAM197Y8-203ENST00000450145 560 ntBASIC16.88■□□□□ 0.29
TCRBV7S3A2A0A539 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.88■□□□□ 0.29
TCRBV7S3A2A0A539 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV7S3A2A0A539 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.88■□□□□ 0.29
TCRBV7S3A2A0A539 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TCRBV7S3A2A0A539 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.88■□□□□ 0.29
TCRBV7S3A2A0A539 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.88■□□□□ 0.29
TCRBV7S3A2A0A539 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.88■□□□□ 0.29
TCRBV7S3A2A0A539 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV7S3A2A0A539 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV7S3A2A0A539 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV7S3A2A0A539 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV7S3A2A0A539 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.88■□□□□ 0.29
TCRBV7S3A2A0A539 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
TCRBV7S3A2A0A539 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.88■□□□□ 0.29
TCRBV7S3A2A0A539 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
TCRBV7S3A2A0A539 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TCRBV7S3A2A0A539 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV7S3A2A0A539 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 POU5F1P6-201ENST00000466990 990 ntBASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 AC105339.3-201ENST00000560043 636 ntBASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 AC004790.2-201ENST00000623588 572 ntBASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV7S3A2A0A539 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 HCG4-201ENST00000418983 998 ntBASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 AC108073.2-201ENST00000464002 357 ntBASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 ACTL9-202ENST00000612068 1252 ntBASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 AP001350.2-201ENST00000625104 1094 ntBASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.86■□□□□ 0.29
TCRBV7S3A2A0A539 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms