Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
BIVM-ERCC5R4GMW8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
BIVM-ERCC5R4GMW8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
BIVM-ERCC5R4GMW8 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
BIVM-ERCC5R4GMW8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
BIVM-ERCC5R4GMW8 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
BIVM-ERCC5R4GMW8 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.93
BIVM-ERCC5R4GMW8 BNIP3P42-201ENST00000454982 569 ntBASIC27.12■■□□□ 1.93
BIVM-ERCC5R4GMW8 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
BIVM-ERCC5R4GMW8 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC27.12■■□□□ 1.93
BIVM-ERCC5R4GMW8 MFF-223ENST00000524634 647 ntTSL 2 BASIC27.12■■□□□ 1.93
BIVM-ERCC5R4GMW8 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC27.12■■□□□ 1.93
BIVM-ERCC5R4GMW8 BNIP3P29-201ENST00000598302 571 ntBASIC27.12■■□□□ 1.93
BIVM-ERCC5R4GMW8 AC011447.5-201ENST00000616168 564 ntBASIC27.12■■□□□ 1.93
BIVM-ERCC5R4GMW8 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
BIVM-ERCC5R4GMW8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
BIVM-ERCC5R4GMW8 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
BIVM-ERCC5R4GMW8 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
BIVM-ERCC5R4GMW8 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
BIVM-ERCC5R4GMW8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC27.11■■□□□ 1.93
BIVM-ERCC5R4GMW8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
BIVM-ERCC5R4GMW8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC27.11■■□□□ 1.93
BIVM-ERCC5R4GMW8 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
BIVM-ERCC5R4GMW8 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
BIVM-ERCC5R4GMW8 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
BIVM-ERCC5R4GMW8 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC27.11■■□□□ 1.93
BIVM-ERCC5R4GMW8 AC092658.1-201ENST00000505836 891 ntBASIC27.11■■□□□ 1.93
BIVM-ERCC5R4GMW8 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC27.11■■□□□ 1.93
BIVM-ERCC5R4GMW8 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC27.11■■□□□ 1.93
BIVM-ERCC5R4GMW8 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC27.11■■□□□ 1.93
BIVM-ERCC5R4GMW8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
BIVM-ERCC5R4GMW8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
BIVM-ERCC5R4GMW8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
BIVM-ERCC5R4GMW8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
BIVM-ERCC5R4GMW8 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC27.11■■□□□ 1.93
BIVM-ERCC5R4GMW8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
BIVM-ERCC5R4GMW8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
BIVM-ERCC5R4GMW8 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
BIVM-ERCC5R4GMW8 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC27.1■■□□□ 1.93
BIVM-ERCC5R4GMW8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC27.1■■□□□ 1.93
BIVM-ERCC5R4GMW8 HNRNPA1P48-201ENST00000562726 1377 ntBASIC27.1■■□□□ 1.93
BIVM-ERCC5R4GMW8 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
BIVM-ERCC5R4GMW8 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
BIVM-ERCC5R4GMW8 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
BIVM-ERCC5R4GMW8 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC27.1■■□□□ 1.93
BIVM-ERCC5R4GMW8 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC27.1■■□□□ 1.93
BIVM-ERCC5R4GMW8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
BIVM-ERCC5R4GMW8 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC27.1■■□□□ 1.93
BIVM-ERCC5R4GMW8 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC27.1■■□□□ 1.93
BIVM-ERCC5R4GMW8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
BIVM-ERCC5R4GMW8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
BIVM-ERCC5R4GMW8 AL645608.8-201ENST00000606034 2086 ntBASIC27.09■■□□□ 1.93
BIVM-ERCC5R4GMW8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
BIVM-ERCC5R4GMW8 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
BIVM-ERCC5R4GMW8 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
BIVM-ERCC5R4GMW8 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
BIVM-ERCC5R4GMW8 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
BIVM-ERCC5R4GMW8 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC27.09■■□□□ 1.93
BIVM-ERCC5R4GMW8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC27.09■■□□□ 1.93
BIVM-ERCC5R4GMW8 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
BIVM-ERCC5R4GMW8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
BIVM-ERCC5R4GMW8 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
BIVM-ERCC5R4GMW8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 FAM86MP-201ENST00000340703 885 ntBASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 MIR4525-201ENST00000580000 75 ntBASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 AC005915.1-201ENST00000624912 2018 ntBASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 DEK-201ENST00000244776 1441 ntTSL 2 BASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 TARDBPP1-201ENST00000442013 1203 ntBASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 AC233724.13-201ENST00000598383 410 ntBASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
BIVM-ERCC5R4GMW8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC27.08■■□□□ 1.92
BIVM-ERCC5R4GMW8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
BIVM-ERCC5R4GMW8 AL592424.1-201ENST00000563624 1536 ntBASIC27.07■■□□□ 1.92
BIVM-ERCC5R4GMW8 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
BIVM-ERCC5R4GMW8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
BIVM-ERCC5R4GMW8 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC27.07■■□□□ 1.92
BIVM-ERCC5R4GMW8 KRT8P37-201ENST00000451609 1420 ntBASIC27.07■■□□□ 1.92
BIVM-ERCC5R4GMW8 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms