Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 AC011462.4-201ENST00000616866 449 ntBASIC6.62□□□□□ -1.35
MACF1Q9UPN3 AL805961.1-203ENST00000641078 1258 ntBASIC6.62□□□□□ -1.35
MACF1Q9UPN3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 CNN2P10-201ENST00000443067 918 ntBASIC6.62□□□□□ -1.35
MACF1Q9UPN3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 AC242376.1-201ENST00000559033 726 ntBASIC6.62□□□□□ -1.35
MACF1Q9UPN3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 SLC22A20-204ENST00000530038 1673 ntBASIC6.62□□□□□ -1.35
MACF1Q9UPN3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 AC013355.1-201ENST00000562625 723 ntBASIC6.62□□□□□ -1.35
MACF1Q9UPN3 SYT17-208ENST00000568433 812 ntTSL 3 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 AC254633.1-201ENST00000606790 345 ntBASIC6.62□□□□□ -1.35
MACF1Q9UPN3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 AC006335.1-201ENST00000445200 547 ntBASIC6.62□□□□□ -1.35
MACF1Q9UPN3 ECM1P1-201ENST00000604092 1279 ntBASIC6.62□□□□□ -1.35
MACF1Q9UPN3 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 POU5F1P6-201ENST00000466990 990 ntBASIC6.62□□□□□ -1.35
MACF1Q9UPN3 RBM4-207ENST00000506523 654 ntTSL 3 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 AC006158.1-201ENST00000610661 249 ntBASIC6.62□□□□□ -1.35
MACF1Q9UPN3 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
MACF1Q9UPN3 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
MACF1Q9UPN3 CD8B2-202ENST00000417670 633 ntBASIC6.61□□□□□ -1.35
MACF1Q9UPN3 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC6.61□□□□□ -1.35
MACF1Q9UPN3 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC6.61□□□□□ -1.35
MACF1Q9UPN3 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
MACF1Q9UPN3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
MACF1Q9UPN3 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MACF1Q9UPN3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC6.61□□□□□ -1.35
MACF1Q9UPN3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
MACF1Q9UPN3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
MACF1Q9UPN3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC6.61□□□□□ -1.35
MACF1Q9UPN3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
MACF1Q9UPN3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
MACF1Q9UPN3 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MACF1Q9UPN3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
MACF1Q9UPN3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MACF1Q9UPN3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
MACF1Q9UPN3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms