Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
CLCF1Q9UBD9 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 AL512652.2-201ENST00000625156 1716 ntBASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
CLCF1Q9UBD9 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 AC073439.1-201ENST00000624121 1774 ntBASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 TUBB3P1-201ENST00000405796 1332 ntBASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 FOXO1B-201ENST00000504678 1527 ntBASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 AC008677.1-201ENST00000519230 1561 ntBASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CLCF1Q9UBD9 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms