Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 RAB34-224ENST00000636513 888 ntTSL 5 BASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 AL603756.1-201ENST00000606511 2163 ntBASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.18■□□□□ 0.82
HMG20BQ9P0W2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 KRT18P34-201ENST00000488218 1270 ntBASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 AC025678.2-201ENST00000562061 970 ntBASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMG20BQ9P0W2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 HLA-A-202ENST00000376806 1854 ntBASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 SPDYE14P-201ENST00000442619 822 ntBASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 HLA-J-202ENST00000469281 1241 ntBASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 AL512356.2-201ENST00000546955 174 ntBASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 AP001059.3-201ENST00000619053 235 ntBASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 Z92544.3-201ENST00000624747 417 ntBASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 AL118508.1-201ENST00000613502 2345 ntBASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMG20BQ9P0W2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMG20BQ9P0W2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMG20BQ9P0W2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.15■□□□□ 0.82
HMG20BQ9P0W2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HMG20BQ9P0W2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.15■□□□□ 0.82
HMG20BQ9P0W2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMG20BQ9P0W2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC20.15■□□□□ 0.82
HMG20BQ9P0W2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMG20BQ9P0W2 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HMG20BQ9P0W2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HMG20BQ9P0W2 HNRNPFP1-201ENST00000391730 1133 ntBASIC20.15■□□□□ 0.82
HMG20BQ9P0W2 AC142381.1-201ENST00000426099 345 ntBASIC20.15■□□□□ 0.82
HMG20BQ9P0W2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.15■□□□□ 0.82
HMG20BQ9P0W2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC20.15■□□□□ 0.82
HMG20BQ9P0W2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.15■□□□□ 0.82
HMG20BQ9P0W2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms