Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.1■□□□□ 0.17
CUEDC1Q9NWM3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.1■□□□□ 0.17
CUEDC1Q9NWM3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 AC254562.1-201ENST00000417586 456 ntBASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 AL645939.2-201ENST00000427340 991 ntBASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 AC005829.1-201ENST00000570002 483 ntBASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 AC011467.4-201ENST00000594891 528 ntBASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CUEDC1Q9NWM3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CUEDC1Q9NWM3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
CUEDC1Q9NWM3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.08■□□□□ 0.17
CUEDC1Q9NWM3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CUEDC1Q9NWM3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
CUEDC1Q9NWM3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CUEDC1Q9NWM3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CUEDC1Q9NWM3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CUEDC1Q9NWM3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CUEDC1Q9NWM3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 AC074386.1-202ENST00000463561 864 ntBASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 AC068137.2-201ENST00000605408 478 ntBASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 AL031055.1-201ENST00000606362 631 ntBASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 AL596442.2-201ENST00000610240 980 ntBASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.08■□□□□ 0.16
CUEDC1Q9NWM3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 MCCD1P2-201ENST00000423228 335 ntBASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.07■□□□□ 0.16
CUEDC1Q9NWM3 HLA-J-202ENST00000469281 1241 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms