Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
RLIMQ9NVW2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.52■□□□□ 0.08
RLIMQ9NVW2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RLIMQ9NVW2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
RLIMQ9NVW2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RLIMQ9NVW2 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.52■□□□□ 0.08
RLIMQ9NVW2 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
RLIMQ9NVW2 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RLIMQ9NVW2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.52■□□□□ 0.08
RLIMQ9NVW2 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RLIMQ9NVW2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.52■□□□□ 0.08
RLIMQ9NVW2 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RLIMQ9NVW2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RLIMQ9NVW2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.52■□□□□ 0.08
RLIMQ9NVW2 HLA-J-202ENST00000469281 1241 ntBASIC15.52■□□□□ 0.08
RLIMQ9NVW2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.52■□□□□ 0.08
RLIMQ9NVW2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RLIMQ9NVW2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RLIMQ9NVW2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
RLIMQ9NVW2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.52■□□□□ 0.08
RLIMQ9NVW2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.52■□□□□ 0.08
RLIMQ9NVW2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.52■□□□□ 0.08
RLIMQ9NVW2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.52■□□□□ 0.08
RLIMQ9NVW2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RLIMQ9NVW2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
RLIMQ9NVW2 TP73-AS1-207ENST00000624167 988 ntBASIC15.52■□□□□ 0.08
RLIMQ9NVW2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.52■□□□□ 0.08
RLIMQ9NVW2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.52■□□□□ 0.08
RLIMQ9NVW2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.52■□□□□ 0.08
RLIMQ9NVW2 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
RLIMQ9NVW2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
RLIMQ9NVW2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RLIMQ9NVW2 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.52■□□□□ 0.07
RLIMQ9NVW2 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.52■□□□□ 0.07
RLIMQ9NVW2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RLIMQ9NVW2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
RLIMQ9NVW2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.52■□□□□ 0.07
RLIMQ9NVW2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RLIMQ9NVW2 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RLIMQ9NVW2 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
RLIMQ9NVW2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RLIMQ9NVW2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RLIMQ9NVW2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RLIMQ9NVW2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RLIMQ9NVW2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
RLIMQ9NVW2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.52■□□□□ 0.07
RLIMQ9NVW2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RLIMQ9NVW2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 AL671710.1-201ENST00000610245 2349 ntBASIC15.51■□□□□ 0.07
RLIMQ9NVW2 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 SLC25A6P2-201ENST00000497974 877 ntBASIC15.51■□□□□ 0.07
RLIMQ9NVW2 RNPS1P1-201ENST00000507437 918 ntBASIC15.51■□□□□ 0.07
RLIMQ9NVW2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.51■□□□□ 0.07
RLIMQ9NVW2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 AC006557.2-201ENST00000592985 1240 ntBASIC15.51■□□□□ 0.07
RLIMQ9NVW2 AC013467.2-201ENST00000605472 835 ntBASIC15.51■□□□□ 0.07
RLIMQ9NVW2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 REXO1L3P-201ENST00000622202 1288 ntBASIC15.51■□□□□ 0.07
RLIMQ9NVW2 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RLIMQ9NVW2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms