Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
FBXO28Q9NVF7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FBXO28Q9NVF7 CRB3P1-201ENST00000449338 276 ntBASIC18.98■□□□□ 0.63
FBXO28Q9NVF7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.98■□□□□ 0.63
FBXO28Q9NVF7 AP002490.2-201ENST00000524791 560 ntBASIC18.98■□□□□ 0.63
FBXO28Q9NVF7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
FBXO28Q9NVF7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.98■□□□□ 0.63
FBXO28Q9NVF7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.98■□□□□ 0.63
FBXO28Q9NVF7 AL035252.4-201ENST00000624174 288 ntBASIC18.98■□□□□ 0.63
FBXO28Q9NVF7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.98■□□□□ 0.63
FBXO28Q9NVF7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FBXO28Q9NVF7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.98■□□□□ 0.63
FBXO28Q9NVF7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FBXO28Q9NVF7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.98■□□□□ 0.63
FBXO28Q9NVF7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
FBXO28Q9NVF7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FBXO28Q9NVF7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
FBXO28Q9NVF7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
FBXO28Q9NVF7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.98■□□□□ 0.63
FBXO28Q9NVF7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
FBXO28Q9NVF7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.98■□□□□ 0.63
FBXO28Q9NVF7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 AL589702.1-201ENST00000641229 1509 ntBASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 AL080243.2-201ENST00000418783 582 ntBASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 AC005034.1-201ENST00000426657 489 ntBASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 AC012645.4-201ENST00000610691 1061 ntBASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 AC105020.1-201ENST00000435356 2205 ntBASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
FBXO28Q9NVF7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 SPTLC1P1-201ENST00000447199 261 ntBASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 AL079307.3-201ENST00000556114 283 ntBASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
FBXO28Q9NVF7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
FBXO28Q9NVF7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
FBXO28Q9NVF7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FBXO28Q9NVF7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.95■□□□□ 0.62
FBXO28Q9NVF7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
FBXO28Q9NVF7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FBXO28Q9NVF7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
FBXO28Q9NVF7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FBXO28Q9NVF7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms