Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 AL139011.1-202ENST00000642063 584 ntBASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 KRT8P49-201ENST00000604166 1432 ntBASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LIN7CQ9NUP9 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 AP002414.1-201ENST00000391405 1147 ntBASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 PRYP5-201ENST00000451909 266 ntBASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 DUX4L17-201ENST00000557360 1267 ntBASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 AL022326.1-202ENST00000641533 845 ntBASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 AC008894.3-201ENST00000624324 3103 ntBASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 AC007950.2-201ENST00000615045 2347 ntBASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LIN7CQ9NUP9 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LIN7CQ9NUP9 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms