Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 KRT16P4-201ENST00000453883 522 ntBASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 BX005266.1-201ENST00000473402 457 ntBASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 NME3-204ENST00000563498 920 ntTSL 2 BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 AL049597.2-201ENST00000565575 961 ntBASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 SIGLEC29P-201ENST00000599873 1114 ntBASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 AL589182.2-201ENST00000619332 1049 ntBASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 PCGF3-213ENST00000620529 1899 ntBASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 NUS1P2-201ENST00000417358 873 ntBASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 AL139424.1-201ENST00000607572 797 ntBASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 AC010491.1-201ENST00000563101 2797 ntBASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC11.47□□□□□ -0.57
CDC42SE2Q9NRR3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 AC131009.4-201ENST00000624048 1740 ntBASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms