Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.71■□□□□ 0.1
SLC52A3Q9NQ40 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SLC52A3Q9NQ40 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SLC52A3Q9NQ40 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
SLC52A3Q9NQ40 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 AC005412.3-201ENST00000580309 715 ntBASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 AC005622.1-201ENST00000636801 1703 ntBASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC52A3Q9NQ40 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 HCG4-201ENST00000418983 998 ntBASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SLC52A3Q9NQ40 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 AC129492.6-201ENST00000611383 1305 ntBASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 AC092919.2-201ENST00000623631 1645 ntBASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 KRT18P27-201ENST00000427733 1299 ntBASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC52A3Q9NQ40 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms