Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD248Q9HCU0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.55■□□□□ 0.4
CD248Q9HCU0 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.55■□□□□ 0.4
CD248Q9HCU0 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.55■□□□□ 0.4
CD248Q9HCU0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CD248Q9HCU0 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD248Q9HCU0 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CD248Q9HCU0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD248Q9HCU0 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.54■□□□□ 0.4
CD248Q9HCU0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD248Q9HCU0 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CD248Q9HCU0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CD248Q9HCU0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CD248Q9HCU0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD248Q9HCU0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.54■□□□□ 0.4
CD248Q9HCU0 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD248Q9HCU0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD248Q9HCU0 KRT18P55-202ENST00000578578 1546 ntBASIC17.54■□□□□ 0.4
CD248Q9HCU0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.54■□□□□ 0.4
CD248Q9HCU0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD248Q9HCU0 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD248Q9HCU0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
CD248Q9HCU0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
CD248Q9HCU0 RHOQP3-201ENST00000437982 621 ntBASIC17.54■□□□□ 0.4
CD248Q9HCU0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD248Q9HCU0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.54■□□□□ 0.4
CD248Q9HCU0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.54■□□□□ 0.4
CD248Q9HCU0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.54■□□□□ 0.4
CD248Q9HCU0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CD248Q9HCU0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.54■□□□□ 0.4
CD248Q9HCU0 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.54■□□□□ 0.4
CD248Q9HCU0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.54■□□□□ 0.4
CD248Q9HCU0 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CD248Q9HCU0 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CD248Q9HCU0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CD248Q9HCU0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CD248Q9HCU0 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CD248Q9HCU0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD248Q9HCU0 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD248Q9HCU0 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.54■□□□□ 0.4
CD248Q9HCU0 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CD248Q9HCU0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CD248Q9HCU0 AL138688.1-201ENST00000624851 1594 ntBASIC17.53■□□□□ 0.4
CD248Q9HCU0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CD248Q9HCU0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CD248Q9HCU0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD248Q9HCU0 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CD248Q9HCU0 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
CD248Q9HCU0 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
CD248Q9HCU0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CD248Q9HCU0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD248Q9HCU0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD248Q9HCU0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CD248Q9HCU0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD248Q9HCU0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD248Q9HCU0 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CD248Q9HCU0 MRPL20P1-201ENST00000400819 433 ntBASIC17.53■□□□□ 0.4
CD248Q9HCU0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.53■□□□□ 0.4
CD248Q9HCU0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.53■□□□□ 0.4
CD248Q9HCU0 MKNK2P1-201ENST00000437526 628 ntBASIC17.53■□□□□ 0.4
CD248Q9HCU0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.53■□□□□ 0.4
CD248Q9HCU0 AC096734.2-201ENST00000562054 433 ntBASIC17.53■□□□□ 0.4
CD248Q9HCU0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CD248Q9HCU0 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.53■□□□□ 0.4
CD248Q9HCU0 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CD248Q9HCU0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD248Q9HCU0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CD248Q9HCU0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.53■□□□□ 0.4
CD248Q9HCU0 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.53■□□□□ 0.4
CD248Q9HCU0 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.53■□□□□ 0.4
CD248Q9HCU0 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD248Q9HCU0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CD248Q9HCU0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD248Q9HCU0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD248Q9HCU0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.52■□□□□ 0.4
CD248Q9HCU0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.52■□□□□ 0.4
CD248Q9HCU0 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD248Q9HCU0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CD248Q9HCU0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD248Q9HCU0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD248Q9HCU0 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD248Q9HCU0 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD248Q9HCU0 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
CD248Q9HCU0 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.52■□□□□ 0.4
CD248Q9HCU0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.52■□□□□ 0.4
CD248Q9HCU0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD248Q9HCU0 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.52■□□□□ 0.4
CD248Q9HCU0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD248Q9HCU0 HTR5BP-201ENST00000430851 1154 ntBASIC17.52■□□□□ 0.4
CD248Q9HCU0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.52■□□□□ 0.4
CD248Q9HCU0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CD248Q9HCU0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.52■□□□□ 0.4
CD248Q9HCU0 PDPK2P-202ENST00000562415 1191 ntBASIC17.52■□□□□ 0.4
CD248Q9HCU0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
CD248Q9HCU0 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CD248Q9HCU0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CD248Q9HCU0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CD248Q9HCU0 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CD248Q9HCU0 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CD248Q9HCU0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms