Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 SLC22A20-204ENST00000530038 1673 ntBASIC14.56□□□□□ -0.08
CDH20Q9HBT6 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 KRT19P2-202ENST00000557173 1012 ntBASIC14.56□□□□□ -0.08
CDH20Q9HBT6 AC002347.1-201ENST00000569543 541 ntBASIC14.56□□□□□ -0.08
CDH20Q9HBT6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 NKILA-202ENST00000614771 2598 ntBASIC14.56□□□□□ -0.08
CDH20Q9HBT6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 AC023274.1-201ENST00000418278 595 ntBASIC14.55□□□□□ -0.08
CDH20Q9HBT6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 MIR4492-201ENST00000581627 80 ntBASIC14.55□□□□□ -0.08
CDH20Q9HBT6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 AC022211.2-201ENST00000585075 2527 ntBASIC14.55□□□□□ -0.08
CDH20Q9HBT6 CICP6-201ENST00000457191 2729 ntBASIC14.55□□□□□ -0.08
CDH20Q9HBT6 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH20Q9HBT6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.54□□□□□ -0.08
CDH20Q9HBT6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH20Q9HBT6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms