Protein–RNA interactions for Protein: Q9H4Q4

PRDM12, PR domain zinc finger protein 12, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM12Q9H4Q4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRDM12Q9H4Q4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.94■□□□□ 0.46
PRDM12Q9H4Q4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.94■□□□□ 0.46
PRDM12Q9H4Q4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PRDM12Q9H4Q4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.94■□□□□ 0.46
PRDM12Q9H4Q4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.94■□□□□ 0.46
PRDM12Q9H4Q4 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.94■□□□□ 0.46
PRDM12Q9H4Q4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.94■□□□□ 0.46
PRDM12Q9H4Q4 AC135586.1-201ENST00000539323 574 ntBASIC17.94■□□□□ 0.46
PRDM12Q9H4Q4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.94■□□□□ 0.46
PRDM12Q9H4Q4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.94■□□□□ 0.46
PRDM12Q9H4Q4 AL031055.1-201ENST00000606362 631 ntBASIC17.94■□□□□ 0.46
PRDM12Q9H4Q4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRDM12Q9H4Q4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRDM12Q9H4Q4 AP001094.4-201ENST00000579008 2176 ntBASIC17.94■□□□□ 0.46
PRDM12Q9H4Q4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRDM12Q9H4Q4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.94■□□□□ 0.46
PRDM12Q9H4Q4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PRDM12Q9H4Q4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 RNU1-129P-201ENST00000384064 167 ntBASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 AC142381.1-201ENST00000426099 345 ntBASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 U1.21-201ENST00000580816 167 ntBASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 MIR4538-201ENST00000581377 78 ntBASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 AC080080.1-201ENST00000625121 2420 ntBASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.93■□□□□ 0.46
PRDM12Q9H4Q4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 AL391825.1-201ENST00000457671 1364 ntBASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 AC119751.2-201ENST00000504529 210 ntBASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 GPR182-203ENST00000622922 591 ntBASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRDM12Q9H4Q4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PRDM12Q9H4Q4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms