Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
COL25A1Q9BXS0 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL25A1Q9BXS0 AGPAT5P1-201ENST00000455855 1019 ntBASIC16.47■□□□□ 0.23
COL25A1Q9BXS0 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL25A1Q9BXS0 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.47■□□□□ 0.23
COL25A1Q9BXS0 AC061975.2-201ENST00000581722 295 ntBASIC16.47■□□□□ 0.23
COL25A1Q9BXS0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.47■□□□□ 0.23
COL25A1Q9BXS0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.47■□□□□ 0.23
COL25A1Q9BXS0 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC16.47■□□□□ 0.23
COL25A1Q9BXS0 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
COL25A1Q9BXS0 FO393412.1-201ENST00000619841 382 ntBASIC16.47■□□□□ 0.23
COL25A1Q9BXS0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.47■□□□□ 0.23
COL25A1Q9BXS0 AL096828.2-201ENST00000567259 1965 ntBASIC16.47■□□□□ 0.23
COL25A1Q9BXS0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL25A1Q9BXS0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
COL25A1Q9BXS0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.47■□□□□ 0.23
COL25A1Q9BXS0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
COL25A1Q9BXS0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.47■□□□□ 0.23
COL25A1Q9BXS0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.47■□□□□ 0.23
COL25A1Q9BXS0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.47■□□□□ 0.23
COL25A1Q9BXS0 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 AL357373.1-201ENST00000394974 322 ntBASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 ACTBP7-201ENST00000418351 1124 ntBASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 CEP164P1-201ENST00000455142 418 ntBASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 REEP5-205ENST00000504247 480 ntTSL 5 BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 AL161670.2-201ENST00000557650 1227 ntBASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 MME-218ENST00000625667 363 ntTSL 5 BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL25A1Q9BXS0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
COL25A1Q9BXS0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
COL25A1Q9BXS0 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 SERBP1P2-201ENST00000436888 1164 ntBASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 DDX39AP1-201ENST00000445147 1181 ntBASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 AC126763.1-201ENST00000552015 2118 ntBASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 ANO7L1-203ENST00000602586 1720 ntBASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
COL25A1Q9BXS0 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.44■□□□□ 0.22
COL25A1Q9BXS0 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL25A1Q9BXS0 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL25A1Q9BXS0 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
COL25A1Q9BXS0 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms