Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 SLC25A1P1-201ENST00000528351 927 ntBASIC16.33■□□□□ 0.2
NPAS2Q99743 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.33■□□□□ 0.2
NPAS2Q99743 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.33■□□□□ 0.2
NPAS2Q99743 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.33■□□□□ 0.2
NPAS2Q99743 NKAPP1-205ENST00000585790 367 ntBASIC16.33■□□□□ 0.2
NPAS2Q99743 AC025062.2-201ENST00000605477 670 ntBASIC16.33■□□□□ 0.2
NPAS2Q99743 TUBB8P12-201ENST00000308911 1335 ntBASIC16.33■□□□□ 0.2
NPAS2Q99743 IL9RP2-201ENST00000423948 1312 ntBASIC16.33■□□□□ 0.2
NPAS2Q99743 TUBB7P-202ENST00000428444 1305 ntBASIC16.33■□□□□ 0.2
NPAS2Q99743 TUBB8P7-204ENST00000567960 1332 ntBASIC16.33■□□□□ 0.2
NPAS2Q99743 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS2Q99743 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
NPAS2Q99743 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS2Q99743 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NPAS2Q99743 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS2Q99743 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.33■□□□□ 0.2
NPAS2Q99743 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
NPAS2Q99743 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS2Q99743 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS2Q99743 ME2P1-201ENST00000426028 1970 ntBASIC16.33■□□□□ 0.2
NPAS2Q99743 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.33■□□□□ 0.2
NPAS2Q99743 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS2Q99743 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS2Q99743 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
NPAS2Q99743 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NPAS2Q99743 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.32■□□□□ 0.2
NPAS2Q99743 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.32■□□□□ 0.2
NPAS2Q99743 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
NPAS2Q99743 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS2Q99743 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS2Q99743 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NPAS2Q99743 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS2Q99743 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS2Q99743 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS2Q99743 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS2Q99743 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS2Q99743 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS2Q99743 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS2Q99743 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.32■□□□□ 0.2
NPAS2Q99743 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.32■□□□□ 0.2
NPAS2Q99743 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.32■□□□□ 0.2
NPAS2Q99743 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
NPAS2Q99743 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.32■□□□□ 0.2
NPAS2Q99743 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.32■□□□□ 0.2
NPAS2Q99743 RPS2P1-201ENST00000434010 821 ntBASIC16.32■□□□□ 0.2
NPAS2Q99743 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
NPAS2Q99743 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.32■□□□□ 0.2
NPAS2Q99743 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS2Q99743 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NPAS2Q99743 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.32■□□□□ 0.2
NPAS2Q99743 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NPAS2Q99743 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.32■□□□□ 0.2
NPAS2Q99743 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.32■□□□□ 0.2
NPAS2Q99743 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NPAS2Q99743 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS2Q99743 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.32■□□□□ 0.2
NPAS2Q99743 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS2Q99743 AL671883.3-201ENST00000603274 991 ntBASIC16.32■□□□□ 0.2
NPAS2Q99743 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.32■□□□□ 0.2
NPAS2Q99743 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
NPAS2Q99743 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.32■□□□□ 0.2
NPAS2Q99743 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.32■□□□□ 0.2
NPAS2Q99743 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS2Q99743 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NPAS2Q99743 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.32■□□□□ 0.2
NPAS2Q99743 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS2Q99743 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS2Q99743 MTHFR-217ENST00000641820 1569 ntBASIC16.32■□□□□ 0.2
NPAS2Q99743 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS2Q99743 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS2Q99743 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS2Q99743 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS2Q99743 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NPAS2Q99743 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NPAS2Q99743 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.31■□□□□ 0.2
NPAS2Q99743 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS2Q99743 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS2Q99743 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS2Q99743 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.31■□□□□ 0.2
NPAS2Q99743 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS2Q99743 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS2Q99743 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS2Q99743 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.31■□□□□ 0.2
NPAS2Q99743 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS2Q99743 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.31■□□□□ 0.2
NPAS2Q99743 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.31■□□□□ 0.2
NPAS2Q99743 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
NPAS2Q99743 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS2Q99743 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS2Q99743 AL353593.2-201ENST00000602529 1483 ntBASIC16.31■□□□□ 0.2
NPAS2Q99743 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS2Q99743 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS2Q99743 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS2Q99743 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.31■□□□□ 0.2
NPAS2Q99743 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NPAS2Q99743 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.31■□□□□ 0.2
NPAS2Q99743 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.31■□□□□ 0.2
NPAS2Q99743 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.31■□□□□ 0.2
NPAS2Q99743 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NPAS2Q99743 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms